RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 PAPSS2O95340 614 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-210ENST00000464078 CHRNB1P11230 501 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 CPB1P15086 417 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 GUCY2CP25092 1073 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 MYH11P35749 1972 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 VIPR2P41587 438 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 FCHO2Q0JRZ9 810 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 SLC10A6Q3KNW5 377 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 RINT1Q6NUQ1 792 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 C1orf186Q6ZWK4 172 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 SHKBP1Q8TBC3 707 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 NUP210Q8TEM1 1887 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-210ENST00000464078 SPIRE2Q8WWL2 714 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 CNTNAP3BQ96NU0 1288 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 CNTNAP3Q9BZ76 1288 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 LMAN1LQ9HAT1 526 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 TUBGCP4Q9UGJ1 667 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 KCNG1Q9UIX4 513 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 YIPF1Q9Y548 306 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 CHD6Q8TD26 2715 aa18.87■□□□□ 0.61
HMGN1-210ENST00000464078 ZNF263O14978 683 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 VNN2O95498 520 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 MYL4P12829 197 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 U2AF2P26368 475 aaKnown RBP eCLIP18.86■□□□□ 0.618e-8■■■■■ 35
HMGN1-210ENST00000464078 AARSP49588 968 aaKnown RBP eCLIP18.86■□□□□ 0.61
HMGN1-210ENST00000464078 HMGN5P82970 282 aaKnown RBP18.86■□□□□ 0.61
HMGN1-210ENST00000464078 PTGDRQ13258 359 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 PLD1Q13393 1074 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 NBR1Q14596 966 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 TEAD2Q15562 447 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 KRT79Q5XKE5 535 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 ZPBP2Q6X784 338 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 RNF19BQ6ZMZ0 732 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 SPEM1Q8N4L4 309 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 LRRC3Q9BY71 257 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 ANKFY1Q9P2R3 1169 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 LIMCH1Q9UPQ0 1083 aa18.86■□□□□ 0.61
HMGN1-210ENST00000464078 HEPACAM2A8MVW5 462 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 CHADO15335 359 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 SLC16A4O15374 487 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 EIF5BO60841 1220 aaKnown RBP18.85■□□□□ 0.61
HMGN1-210ENST00000464078 RETP07949 1114 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 LRPAP1P30533 357 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 PRPHP41219 470 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 CXCL12P48061 93 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 YWHAHQ04917 246 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-210ENST00000464078 MCL1Q07820 350 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 STRN3Q13033 797 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 GNL2Q13823 731 aaKnown RBP18.85■□□□□ 0.61
HMGN1-210ENST00000464078 LRRC32Q14392 662 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 GAS6Q14393 721 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 TMC8Q8IU68 726 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 CCDC83Q8IWF9 413 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 TMEM161BQ8NDZ6 487 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 KCNN1Q92952 543 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 ZBTB45Q96K62 511 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-210ENST00000464078 PLEKHA5Q9HAU0 1116 aa18.85■□□□□ 0.61
HMGN1-210ENST00000464078 TSC2P49815 1807 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 MAPTP10636 758 aaKnown RBP18.84■□□□□ 0.61
HMGN1-210ENST00000464078 HARSP12081 509 aaKnown RBP18.84■□□□□ 0.61
HMGN1-210ENST00000464078 GJA1P17302 382 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 CYP3A5P20815 502 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 CCNE1P24864 410 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 MARCKSP29966 332 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-210ENST00000464078 CNR2P34972 360 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 TOB1P50616 345 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-210ENST00000464078 SATB1Q01826 763 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 GPR17Q13304 367 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 KCNK18Q7Z418 384 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 KCTD17Q8N5Z5 321 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 NETO1Q8TDF5 533 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 RSPRY1Q96DX4 576 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 MMTAG2Q9BU76 263 aaKnown RBP18.84■□□□□ 0.61
HMGN1-210ENST00000464078 DNAJC25Q9H1X3 360 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 SLITRK6Q9H5Y7 841 aa18.84■□□□□ 0.61
HMGN1-210ENST00000464078 C8orf33Q9H7E9 229 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-210ENST00000464078 KIF26AQ9ULI4 1882 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-210ENST00000464078 TTC26A0AVF1 554 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 OR6C75A6NL08 312 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 PP2D1A8MPX8 630 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 SLC30A4O14863 429 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 CLDN3O15551 220 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 CLTAP09496 248 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 CXCL8P10145 99 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 PLS3P13797 630 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 SPEM2Q0P670 501 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 ZBTB6Q15916 424 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 CSGALNACT1Q8TDX6 532 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 KCND2Q9NZV8 630 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 PCDHB6Q9Y5E3 794 aa18.83■□□□□ 0.6
HMGN1-210ENST00000464078 A0A1W2PRU2 124 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 MYBPHLA2RUH7 354 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 DCDC2BA2VCK2 349 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 FOXD2O60548 495 aaPredicted RBP18.82■□□□□ 0.6
HMGN1-210ENST00000464078 ADRB1P08588 477 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 HOXA6P31267 233 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 SMTNP53814 917 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 EPHB3P54753 998 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 IL17AQ16552 155 aa18.82■□□□□ 0.6
HMGN1-210ENST00000464078 LPAL2Q16609 132 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms