RNA–Protein interactions for RNA: ENST00000463634.6

PRPF4B-203, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 2,590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-203ENST00000463634 KCNJ1P48048 391 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 AP3M2P53677 418 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 PTP4A2Q12974 167 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 MAMLD1Q13495 774 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 TRPC3Q13507 836 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 DHX34Q14147 1143 aaKnown RBP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 PPP2R5EQ16537 467 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 CCL15Q16663 113 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 TMC3Q7Z5M5 1100 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 UBLCP1Q8WVY7 318 aaPredicted RBP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 BRI3BPQ8WY22 251 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 TRIM11Q96F44 468 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 FDXACB1Q9BRP7 624 aaPredicted RBP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 NIF3L1Q9GZT8 377 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 XYLT2Q9H1B5 865 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 DNAH12Q6ZR08 3092 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 PLXNB2O15031 1838 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 PLXNA1Q9UIW2 1896 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 FAM187AA6NFU0 413 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 GPR25O00155 361 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 MEFVO15553 781 aaPredicted RBP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 GH1P01241 217 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 KRT19P08727 400 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 HSPA6P17066 643 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 ACTN2P35609 894 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 ASPAP45381 313 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 PLTPP55058 493 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 HNRNPH2P55795 449 aaKnown RBP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 CCNA1P78396 465 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 DHX9Q08211 1270 aaKnown RBP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 LAMC2Q13753 1193 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 SGSM1Q2NKQ1 1148 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 ZNF699Q32M78 642 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 CEP85LQ5SZL2 805 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 TTC19Q6DKK2 380 aaPredicted RBP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 TRIM72Q6ZMU5 477 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 PHF13Q86YI8 300 aaPredicted RBP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 LRRC45Q96CN5 670 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 CPB2Q96IY4 423 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 FMO2Q99518 471 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 ZDHHC18Q9NUE0 388 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 NXF1Q9UBU9 619 aaKnown RBP8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 PCYOX1Q9UHG3 505 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 POLIQ9UNA4 740 aa8.61□□□□□ -1.03
PRPF4B-203ENST00000463634 MGAMO43451 1857 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 IQCA1LA6NCM1 817 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 H0YGN5 161 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 PROSCO94903 275 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 SNAI1O95863 264 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 NFICP08651 508 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 CETPP11597 493 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 COILP38432 576 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 RPL21P46778 160 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 RAP1GAPP47736 663 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 TAS2R40P59535 323 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 RPL7AP62424 266 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 SNX1Q13596 522 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 ZSCAN26Q16670 478 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 CYP1B1Q16678 543 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 LIN9Q5TKA1 542 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 ZDHHC24Q6UX98 284 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 CCDC105Q8IYK2 499 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 C1orf131Q8NDD1 294 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 PPTC7Q8NI37 304 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 FBXO25Q8TCJ0 367 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 C1orf54Q8WWF1 131 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 ATG4AQ8WYN0 398 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 TFAP2BQ92481 460 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 DDX27Q96GQ7 796 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 KATNBL1Q9H079 304 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 CENPHQ9H3R5 247 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 LRRC4CQ9HCJ2 640 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 GRHL1Q9NZI5 618 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 MTUS1Q9ULD2 1270 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 AKT3Q9Y243 479 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 USTQ9Y2C2 406 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 ATP8A1Q9Y2Q0 1164 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 NFS1Q9Y697 457 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 LOC102724159A0A0B4J2E5 919 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 TLR3O15455 904 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 B4GALT4O60513 344 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 TNNC2P02585 160 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 MMP8P22894 467 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 GJC1P36383 396 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 PHKA2P46019 1235 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 ATP1A2P50993 1020 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 ZNF844Q08AG5 666 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 ORC1Q13415 861 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 PWP2Q15269 919 aaKnown RBP8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 GPR162Q16538 588 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 AMHR2Q16671 573 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 ZNF484Q5JVG2 852 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 PLEKHA7Q6IQ23 1121 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 LEKR1Q6ZMV7 388 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 PNMA8AQ86V59 439 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 CD302Q8IX05 232 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 PPP1R13LQ8WUF5 828 aa8.6□□□□□ -1.03
PRPF4B-203ENST00000463634 ANKRD36BP1Q96IX9 119 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms