RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 CCR2P41597 374 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 QARSP47897 775 aaKnown RBP12.22□□□□□ -0.45
SSR3-202ENST00000463503 CXCL12P48061 93 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 CCDC6Q16204 474 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 FAM78AQ5JUQ0 283 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 STPG1Q5TH74 334 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 RESP18Q5W5W9 173 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 SHC4Q6S5L8 630 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 VITQ6UXI7 678 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 Q6ZS52 159 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 RTL10Q7L3V2 364 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 CDR2LQ86X02 465 aaPredicted RBP12.22□□□□□ -0.45
SSR3-202ENST00000463503 CATSPER3Q86XQ3 398 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 CEP57Q86XR8 500 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 SPEM1Q8N4L4 309 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 TCEAL4Q96EI5 215 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 CEP170P1Q96L14 293 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 ASB16Q96NS5 453 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 CLIC6Q96NY7 704 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 PYM1Q9BRP8 204 aaKnown RBP12.22□□□□□ -0.45
SSR3-202ENST00000463503 ZSWIM4Q9H7M6 989 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 BRD9Q9H8M2 597 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 TSC2P49815 1807 aa12.22□□□□□ -0.45
SSR3-202ENST00000463503 ARHGEF37A1IGU5 675 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 ZNF806P0C7X5 589 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 FGFR3P22607 806 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 IGFBP6P24592 240 aaPredicted RBP12.21□□□□□ -0.45
SSR3-202ENST00000463503 TXLNAP40222 546 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 UBA7P41226 1012 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 CAPSQ13938 189 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 TMEM119Q4V9L6 283 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 SLC27A1Q6PCB7 646 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.45
SSR3-202ENST00000463503 IRF7Q92985 503 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 DYDC2Q96IM9 177 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 TRMT61BQ9BVS5 477 aaKnown RBP12.21□□□□□ -0.45
SSR3-202ENST00000463503 LSM14BQ9BX40 385 aaKnown RBP12.21□□□□□ -0.45
SSR3-202ENST00000463503 TRIM6Q9C030 488 aaPredicted RBP12.21□□□□□ -0.45
SSR3-202ENST00000463503 GDPD2Q9HCC8 539 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 RBM12Q9NTZ6 932 aaKnown RBP12.21□□□□□ -0.45
SSR3-202ENST00000463503 HPSEQ9Y251 543 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 CDY1Q9Y6F8 540 aa12.21□□□□□ -0.45
SSR3-202ENST00000463503 THADAQ6YHU6 1953 aa12.21□□□□□ -0.46
SSR3-202ENST00000463503 WDR27A2RRH5 827 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 GOLGA6L22H0YM25 854 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 INO80B-WBP1J3KQ70 363 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 ASAP2O43150 1006 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 MED24O75448 989 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 EPN2O95208 641 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 NPTXRO95502 500 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 CCNE1P24864 410 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 GDI1P31150 447 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 UBE2HP62256 183 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 PLA2G2CQ5R387 149 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 HEATR6Q6AI08 1181 aaKnown RBP12.2□□□□□ -0.46
SSR3-202ENST00000463503 PSAPL1Q6NUJ1 521 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 PDXDC1Q6P996 788 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 EXOC8Q8IYI6 725 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 HACE1Q8IYU2 909 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 ASAP3Q8TDY4 903 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 SNX29Q8TEQ0 813 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 TCP11Q8WWU5 503 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 CALML4Q96GE6 196 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
SSR3-202ENST00000463503 EPSTI1Q96J88 318 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 NACC1Q96RE7 527 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 MTRQ99707 1265 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 LXNQ9BS40 222 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 NFKBIZQ9BYH8 718 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 ARRDC1-AS1Q9H2J1 176 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 ZFP14Q9HCL3 533 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 ANKEF1Q9NU02 776 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 FAM13BQ9NYF5 915 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 STK17AQ9UEE5 414 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 CCDC39Q9UFE4 941 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 USP25Q9UHP3 1055 aa12.2□□□□□ -0.46
SSR3-202ENST00000463503 PI4KAP42356 2102 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 ABCA7Q8IZY2 2146 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 A0A1B0GUA9 196 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 PP2D1A8MPX8 630 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 TMEM189-UBE2V1I3L0A0 370 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 ZBTB39O15060 712 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 MOSPD3O75425 235 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 PSMC3P17980 439 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 CDC25AP30304 524 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 HOXA6P31267 233 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 YWHABP31946 246 aaKnown RBP12.19□□□□□ -0.46
SSR3-202ENST00000463503 CCT6AP40227 531 aaKnown RBP12.19□□□□□ -0.46
SSR3-202ENST00000463503 RAP1GAPP47736 663 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 MLLT6P55198 1093 aaPredicted RBP12.19□□□□□ -0.46
SSR3-202ENST00000463503 POU5F1BQ06416 359 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 ELAVL2Q12926 359 aaKnown RBP12.19□□□□□ -0.46
SSR3-202ENST00000463503 CD300LGQ6UXG3 332 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 CCDC73Q6ZRK6 1079 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 USP49Q70CQ1 688 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 WDR5BQ86VZ2 330 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 C12orf50Q8NA57 414 aaPredicted RBP12.19□□□□□ -0.46
SSR3-202ENST00000463503 GATA6Q92908 595 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 ZSWIM3Q96MP5 696 aa12.19□□□□□ -0.46
SSR3-202ENST00000463503 PNMA5Q96PV4 448 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms