RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 TWF1Q12792 350 aa14.84□□□□□ -0.03
C9orf3-211ENST00000463372 C2orf27AQ580R0 203 aa14.84□□□□□ -0.03
C9orf3-211ENST00000463372 XKR3Q5GH77 459 aa14.84□□□□□ -0.03
C9orf3-211ENST00000463372 MDGA1Q8NFP4 955 aa14.84□□□□□ -0.03
C9orf3-211ENST00000463372 RLN3Q8WXF3 142 aa14.84□□□□□ -0.03
C9orf3-211ENST00000463372 NXPE2Q96DL1 559 aa14.84□□□□□ -0.03
C9orf3-211ENST00000463372 CPB2Q96IY4 423 aa14.84□□□□□ -0.03
C9orf3-211ENST00000463372 FNBP1Q96RU3 617 aa14.84□□□□□ -0.03
C9orf3-211ENST00000463372 P2RY13Q9BPV8 354 aa14.84□□□□□ -0.03
C9orf3-211ENST00000463372 ALDH1A2O94788 518 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 TKTP29401 623 aaKnown RBP14.83□□□□□ -0.04
C9orf3-211ENST00000463372 P2RY2P41231 377 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 MCM2P49736 904 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 GNAQP50148 359 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 GALK1P51570 392 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 RUNX3Q13761 415 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 NBR1Q14596 966 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 SLC8B1Q6J4K2 584 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 ZNF513Q8N8E2 541 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-211ENST00000463372 CCDC26Q8TAB7 109 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 SETD7Q8WTS6 366 aaKnown RBP14.83□□□□□ -0.04
C9orf3-211ENST00000463372 DDX27Q96GQ7 796 aaKnown RBP14.83□□□□□ -0.04
C9orf3-211ENST00000463372 CEP89Q96ST8 783 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 MAP3K14Q99558 947 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 FBRSL1Q9HCM7 1045 aaKnown RBP14.83□□□□□ -0.04
C9orf3-211ENST00000463372 PCOLCE2Q9UKZ9 415 aa14.83□□□□□ -0.04
C9orf3-211ENST00000463372 hCG_1642624A0A1W2PR95 340 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 TMEM150BA6NC51 233 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 TSPAN1O60635 241 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 CBFA2T3O75081 653 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 GJB3O75712 270 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 SEMG2Q02383 582 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 AP3B2Q13367 1082 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 BYSLQ13895 437 aaKnown RBP14.82□□□□□ -0.04
C9orf3-211ENST00000463372 LY6DQ14210 128 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 PCBP1Q15365 356 aaKnown RBP eCLIP14.82□□□□□ -0.04
C9orf3-211ENST00000463372 PREPLQ4J6C6 727 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-211ENST00000463372 STXBP5Q5T5C0 1151 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 TEX2Q8IWB9 1127 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 OLIG1Q8TAK6 271 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 PRPF31Q8WWY3 499 aaKnown RBP14.82□□□□□ -0.04
C9orf3-211ENST00000463372 PNMA5Q96PV4 448 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 RIC8AQ9NPQ8 531 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 GKN1Q9NS71 199 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 TRIP11Q15643 1979 aa14.82□□□□□ -0.04
C9orf3-211ENST00000463372 RELNP78509 3460 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 GOLGA8CPA6NN73 597 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 AP5Z1O43299 807 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 TRAPPC3O43617 180 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 CHMP2AO43633 222 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 TLX3O43711 291 aaPredicted RBP14.81□□□□□ -0.04
C9orf3-211ENST00000463372 PLEKHA8P1O95397 391 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 THP07101 528 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 SFNP31947 248 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 C4orf17Q53FE4 359 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 TPGS2Q68CL5 300 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 CMTR1Q8N1G2 835 aaKnown RBP14.81□□□□□ -0.04
C9orf3-211ENST00000463372 SRBD1Q8N5C6 995 aaKnown RBP14.81□□□□□ -0.04
C9orf3-211ENST00000463372 PSPC1Q8WXF1 523 aaKnown RBP14.81□□□□□ -0.04
C9orf3-211ENST00000463372 CHFRQ96EP1 664 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 TRIM4Q9C037 500 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 EBF3Q9H4W6 596 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 PAXBP1Q9Y5B6 917 aa14.81□□□□□ -0.04
C9orf3-211ENST00000463372 DDX11L8A8MPP1 907 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 PLK4O00444 970 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 ATXN1LP0C7T5 689 aaKnown RBP14.8□□□□□ -0.04
C9orf3-211ENST00000463372 U2AF2P26368 475 aaKnown RBP eCLIP14.8□□□□□ -0.043e-8■□□□□ 10.3
C9orf3-211ENST00000463372 ADSSP30520 456 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 ADCY7P51828 1080 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 JAK3P52333 1124 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 NAPAP54920 295 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 RIPPLY3P57055 190 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 LAMTOR4Q0VGL1 99 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 ARHGAP15Q53QZ3 475 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 ZNF574Q6ZN55 896 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-211ENST00000463372 RNF149Q8NC42 400 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 WHAMMQ8TF30 809 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 SLC7A3Q8WY07 619 aa14.8□□□□□ -0.04
C9orf3-211ENST00000463372 HEMK1Q9Y5R4 338 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-211ENST00000463372 DDAH1O94760 285 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 B3GAT3O94766 335 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 NPTXRO95502 500 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 CALM1P0DP23 149 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 CALM2P0DP24 149 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 CALM3P0DP25 149 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 GPR158Q5T848 1215 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 FRMD1Q8N878 549 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 TBC1D32Q96NH3 1257 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 CDC6Q99741 560 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 FAM83CQ9BQN1 747 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 PRDM16Q9HAZ2 1276 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 HPS4Q9NQG7 708 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 TOR4AQ9NXH8 423 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 BCCIPQ9P287 314 aaKnown RBP eCLIP14.79□□□□□ -0.04
C9orf3-211ENST00000463372 CABIN1Q9Y6J0 2220 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 AK5Q9Y6K8 562 aa14.79□□□□□ -0.04
C9orf3-211ENST00000463372 OTOL1A6NHN0 477 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-211ENST00000463372 DKK1O94907 266 aa14.78□□□□□ -0.04
C9orf3-211ENST00000463372 PRAMEF12O95522 483 aa14.78□□□□□ -0.04
C9orf3-211ENST00000463372 CYP3A4P08684 503 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms