RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 BRD9Q9H8M2 597 aa6.71□□□□□ -1.34
COPS3-205ENST00000463097 WASH6PQ9NQA3 447 aa6.71□□□□□ -1.34
COPS3-205ENST00000463097 JADE2Q9NQC1 790 aa6.71□□□□□ -1.34
COPS3-205ENST00000463097 RGS17Q9UGC6 210 aaPredicted RBP6.71□□□□□ -1.34
COPS3-205ENST00000463097 TMEM98Q9Y2Y6 226 aa6.71□□□□□ -1.34
COPS3-205ENST00000463097 IRS2Q9Y4H2 1338 aa6.71□□□□□ -1.34
COPS3-205ENST00000463097 ATRNL1Q5VV63 1379 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 C2orf78A6NCI8 922 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 CYP7B1O75881 506 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 HMGCRP04035 888 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 GJB1P08034 283 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 ATF2P15336 505 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 ALOX15P16050 662 aaPredicted RBP6.7□□□□□ -1.34
COPS3-205ENST00000463097 ELF1P32519 619 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 ALDH1A3P47895 512 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 FSTL1Q12841 308 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 ADAM15Q13444 863 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 TOP3AQ13472 1001 aaPredicted RBP6.7□□□□□ -1.34
COPS3-205ENST00000463097 SMAD4Q13485 552 aaKnown RBP6.7□□□□□ -1.34
COPS3-205ENST00000463097 PDE1CQ14123 709 aaPredicted RBP6.7□□□□□ -1.34
COPS3-205ENST00000463097 FAM110CQ1W6H9 321 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 PRSS36Q5K4E3 855 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 VPS53Q5VIR6 699 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 SULT6B1Q6IMI4 303 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 LIN54Q6MZP7 749 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 B3GNT8Q7Z7M8 397 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 LRRTM4Q86VH4 590 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 IRF2BP1Q8IU81 584 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 TP53INP2Q8IXH6 220 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 MPP5Q8N3R9 675 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 DNAJC5GQ8N7S2 189 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 MDM1Q8TC05 714 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 RUBCNQ92622 972 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 HDAC2Q92769 488 aaKnown RBP6.7□□□□□ -1.34
COPS3-205ENST00000463097 EID2BQ96D98 161 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 KIRREL1Q96J84 757 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 SNX27Q96L92 541 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 C11orf84Q9BUA3 381 aaPredicted RBP6.7□□□□□ -1.34
COPS3-205ENST00000463097 KATNAL1Q9BW62 490 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.7□□□□□ -1.34
COPS3-205ENST00000463097 OSBPL5Q9H0X9 879 aaPredicted RBP6.7□□□□□ -1.34
COPS3-205ENST00000463097 UBN1Q9NPG3 1134 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 RIC8AQ9NPQ8 531 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 CFAP97Q9P2B7 532 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 SLC13A4Q9UKG4 626 aa6.7□□□□□ -1.34
COPS3-205ENST00000463097 SCAF8Q9UPN6 1271 aaKnown RBP6.7□□□□□ -1.34
COPS3-205ENST00000463097 A0A087WWL8 130 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 TMEM233B4DJY2 109 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 TISP43B9A030 160 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 B9A039 149 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 MTSS1O43312 755 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 A1BGP04217 495 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 CAPN3P20807 821 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 IL1R2P27930 398 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 ETV4P43268 484 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 COPAP53621 1224 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 MXRA7P84157 204 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 ZNF792Q3KQV3 632 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 DCAF12L1Q5VU92 463 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 FYB2Q5VWT5 728 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 AFMIDQ63HM1 303 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 OTUD7BQ6GQQ9 843 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 TBC1D1Q86TI0 1168 aaPredicted RBP6.69□□□□□ -1.34
COPS3-205ENST00000463097 FTSJ3Q8IY81 847 aaKnown RBP6.69□□□□□ -1.34
COPS3-205ENST00000463097 SLC15A4Q8N697 577 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 TTLL6Q8N841 843 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 KYQ8NBH2 561 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 SIMC1Q8NDZ2 872 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 SPPL3Q8TCT6 385 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 OTUD7AQ8TE49 926 aaPredicted RBP6.69□□□□□ -1.34
COPS3-205ENST00000463097 ZNF384Q8TF68 577 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 GCDHQ92947 438 aaPredicted RBP6.69□□□□□ -1.34
COPS3-205ENST00000463097 PYM1Q9BRP8 204 aaKnown RBP6.69□□□□□ -1.34
COPS3-205ENST00000463097 PACSIN1Q9BY11 444 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 KATNBL1Q9H079 304 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 RLIMQ9NVW2 624 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 KIF17Q9P2E2 1029 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 SRP68Q9UHB9 627 aaKnown RBP6.69□□□□□ -1.34
COPS3-205ENST00000463097 RABGAP1Q9Y3P9 1069 aa6.69□□□□□ -1.34
COPS3-205ENST00000463097 RBM8AQ9Y5S9 174 aaKnown RBP6.69□□□□□ -1.34
COPS3-205ENST00000463097 A0A0B4J269 797 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 EXOC5O00471 708 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 SLC43A1O75387 559 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 RASSF9O75901 435 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 UNC5CO95185 931 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 GNAI2P04899 355 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 RAP2AP10114 183 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 RARBP10826 455 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 IDEP14735 1019 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 XBP1P17861 261 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 KRT9P35527 623 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 SLC11A2P49281 568 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 MEOX1P50221 254 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 POLE2P56282 527 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 POU6F2P78424 691 aaPredicted RBP6.68□□□□□ -1.34
COPS3-205ENST00000463097 KCNMA1Q12791 1236 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 ADCK5Q3MIX3 580 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 ARHGAP15Q53QZ3 475 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 FAM47AQ5JRC9 791 aa6.68□□□□□ -1.34
COPS3-205ENST00000463097 ANKRD45Q5TZF3 282 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms