RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 TC2NQ8N9U0 490 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 SPC24Q8NBT2 197 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 NIF3L1Q9GZT8 377 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 UBE2TQ9NPD8 197 aaPredicted RBP15.41■□□□□ 0.06
COL6A1-202ENST00000463060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.41■□□□□ 0.062e-6■■■■■ 149.1
COL6A1-202ENST00000463060 HCSTQ9UBK5 93 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 MYO6Q9UM54 1294 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 CNTN6Q9UQ52 1028 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 SLC4A7Q9Y6M7 1214 aa15.41■□□□□ 0.06
COL6A1-202ENST00000463060 KPNA7A9QM74 516 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 EFEMP2O95967 443 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 LINC00271P0C7V0 271 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 ACO1P21399 889 aaKnown RBP15.4■□□□□ 0.06
COL6A1-202ENST00000463060 PAX3P23760 479 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 HNRNPH3P31942 346 aaKnown RBP15.4■□□□□ 0.06
COL6A1-202ENST00000463060 MFAP3P55082 362 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 ZBED6P86452 979 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 MYO1EQ12965 1108 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 CUL2Q13617 745 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 SHHQ15465 462 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 WDR72Q3MJ13 1102 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 ZNF667Q5HYK9 610 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 PRPF38BQ5VTL8 546 aaKnown RBP15.4■□□□□ 0.06
COL6A1-202ENST00000463060 ENOSF1Q7L5Y1 443 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 PPFIBP1Q86W92 1011 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 HERC6Q8IVU3 1022 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 DRC7Q8IY82 874 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 SHC3Q92529 594 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 RABGGTAQ92696 567 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 FAM81BQ96LP2 452 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 SLC9A7Q96T83 725 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 ARID3AQ99856 593 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 TMEM175Q9BSA9 504 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 IMPG2Q9BZV3 1241 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 SDCBP2Q9H190 292 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 NLRC4Q9NPP4 1024 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 POLIQ9UNA4 740 aa15.4■□□□□ 0.06
COL6A1-202ENST00000463060 LUC7L2Q9Y383 392 aaKnown RBP15.4■□□□□ 0.06
COL6A1-202ENST00000463060 AKR1B15C9JRZ8 316 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-202ENST00000463060 FOXN3O00409 490 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-202ENST00000463060 NRP1O14786 923 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 MFAP3LO75121 409 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 GALTP07902 379 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 FAM163BP0C2L3 166 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 TBXAS1P24557 533 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-202ENST00000463060 SLC11A1P49279 550 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 TAF6P49848 677 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 RNASELQ05823 741 aaKnown RBP15.39■□□□□ 0.05
COL6A1-202ENST00000463060 CCDC173Q0VFZ6 552 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 DRAP1Q14919 205 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-202ENST00000463060 SV2CQ496J9 727 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 PAN2Q504Q3 1202 aaKnown RBP15.39■□□□□ 0.05
COL6A1-202ENST00000463060 FAM117BQ6P1L5 589 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 PDXDC1Q6P996 788 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 LRRC43Q8N309 656 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 PPM1KQ8N3J5 372 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 CCDC150Q8NCX0 1101 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-202ENST00000463060 CPLX3Q8WVH0 158 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 ZNF560Q96MR9 790 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 DNAJC7Q99615 494 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 RAD9AQ99638 391 aa15.39■□□□□ 0.05
COL6A1-202ENST00000463060 FAM124BQ9H5Z6 455 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-202ENST00000463060 F8VZ95 297 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 F8W810 466 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 H0YGN5 161 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 M0QZQ0 153 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 ALDH2P05091 517 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 ITGB1P05556 798 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 ATP2A2P16615 1042 aaKnown RBP15.38■□□□□ 0.05
COL6A1-202ENST00000463060 FECHP22830 423 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 KRT9P35527 623 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 ADKP55263 362 aaKnown RBP15.38■□□□□ 0.05
COL6A1-202ENST00000463060 GOLGA8FQ08AF8 430 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 GOLGA8DPQ0D2H9 430 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 SOWAHAQ2M3V2 549 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 TIGD5Q53EQ6 642 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 E4F1Q66K89 784 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-202ENST00000463060 DPH6Q7L8W6 267 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 CCDC186Q7Z3E2 898 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 FAM71AQ8IYT1 594 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 SYN2Q92777 582 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-202ENST00000463060 SENP8Q96LD8 212 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 FAM193BQ96PV7 902 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-202ENST00000463060 MTIF3Q9H2K0 278 aaKnown RBP15.38■□□□□ 0.05
COL6A1-202ENST00000463060 CYP3A43Q9HB55 503 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 AIPL1Q9NZN9 384 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 NXF1Q9UBU9 619 aaKnown RBP15.38■□□□□ 0.05
COL6A1-202ENST00000463060 R3HCC1Q9Y3T6 440 aaKnown RBP15.38■□□□□ 0.05
COL6A1-202ENST00000463060 INSL6Q9Y581 213 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 MRPL42Q9Y6G3 142 aaKnown RBP15.38■□□□□ 0.05
COL6A1-202ENST00000463060 CEP290O15078 2479 aa15.38■□□□□ 0.05
COL6A1-202ENST00000463060 LRRC53A6NM62 1247 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 B3GAT3O94766 335 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 KIF4AO95239 1232 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 WEE2P0C1S8 567 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 BMP8BP34820 402 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 OR1G1P47890 313 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 CDH8P55286 799 aa15.37■□□□□ 0.05
COL6A1-202ENST00000463060 BCAR1P56945 870 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms