RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 AOC1P19801 751 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 TYMPP19971 482 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 STAT6P42226 847 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 ACOT2P49753 483 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 MRE11P49959 708 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 AMPD3Q01432 767 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 MYBPC2Q14324 1141 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 TMEM132DQ14C87 1099 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 ZBTB41Q5SVQ8 909 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 L1TD1Q5T7N2 865 aaKnown RBP7.9□□□□□ -1.14
PTPRF-210ENST00000463041 CYP4A22Q5TCH4 519 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 ATL3Q6DD88 541 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 JADE1Q6IE81 842 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 IQCEQ6IPM2 695 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 SFR1Q86XK3 245 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 NT5DC4Q86YG4 428 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 CCDC65Q8IXS2 484 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 SIX5Q8N196 739 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 ELMOD1Q8N336 334 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 TMEM105Q8N8V8 129 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 FLCNQ8NFG4 579 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 ITFG1Q8TB96 612 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 POMGNT1Q8WZA1 660 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 SENP8Q96LD8 212 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 CUEDC2Q9H467 287 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 SLC2A4RGQ9NR83 387 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 OLFML3Q9NRN5 406 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 PANK4Q9NVE7 773 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 HCFC1R1Q9NWW0 138 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 MRPS23Q9Y3D9 190 aaKnown RBP7.9□□□□□ -1.14
PTPRF-210ENST00000463041 C2CD2Q9Y426 696 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 NUMBLQ9Y6R0 609 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 VPS13AQ96RL7 3174 aa7.9□□□□□ -1.14
PTPRF-210ENST00000463041 WDR87Q6ZQQ6 2873 aa7.9□□□□□ -1.15
PTPRF-210ENST00000463041 FAM186AA6NE01 2351 aa7.9□□□□□ -1.15
PTPRF-210ENST00000463041 FRMD3A2A2Y4 597 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 KRBA1A5PL33 1030 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 CUTAO60888 179 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 IL18RAPO95256 599 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 GCNT3O95395 438 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 CYP11A1P05108 521 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 HSP90AA1P07900 732 aaKnown RBP7.89□□□□□ -1.15
PTPRF-210ENST00000463041 CFHP08603 1231 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 IDEP14735 1019 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 GARTP22102 1010 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 ADSSP30520 456 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 GPC5P78333 572 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 PFKPQ01813 784 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 ADCY1Q08828 1119 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 GPR17Q13304 367 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 C9orf57Q5W0N0 161 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 OVOS1Q6IE37 1185 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 PHLDB3Q6NSJ2 640 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 ARMCX5Q6P1M9 558 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 PARM1Q6UWI2 310 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 CRELD2Q6UXH1 353 aaPredicted RBP7.89□□□□□ -1.15
PTPRF-210ENST00000463041 RNF19BQ6ZMZ0 732 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 HSCBQ8IWL3 235 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 NPAS3Q8IXF0 933 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 SYCP3Q8IZU3 236 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 IQUBQ8NA54 791 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 LEMD2Q8NC56 503 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 CACTINQ8WUQ7 758 aaKnown RBP7.89□□□□□ -1.15
PTPRF-210ENST00000463041 ATOH1Q92858 354 aaPredicted RBP7.89□□□□□ -1.15
PTPRF-210ENST00000463041 FGF14Q92915 247 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 SHDQ96IW2 340 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 CORO1BQ9BR76 489 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 RPP25Q9BUL9 199 aaKnown RBP7.89□□□□□ -1.15
PTPRF-210ENST00000463041 GPR88Q9GZN0 384 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 TNMDQ9H2S6 317 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 TMEM206Q9H813 350 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 KBTBD4Q9NVX7 518 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 DPP3Q9NY33 737 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 TBC1D7Q9P0N9 293 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 DSEQ9UL01 958 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 TIMM13Q9Y5L4 95 aaPredicted RBP7.89□□□□□ -1.15
PTPRF-210ENST00000463041 INSL5Q9Y5Q6 135 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 USP34Q70CQ2 3546 aa7.89□□□□□ -1.15
PTPRF-210ENST00000463041 A0A087X0B3 334 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 TISP43B9A030 160 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 H0Y858 1186 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 CYB561D2O14569 222 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 KIAA0391O15091 583 aaKnown RBP7.88□□□□□ -1.15
PTPRF-210ENST00000463041 PI15O43692 258 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 ECI2O75521 394 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 NFICP08651 508 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 ZSCAN22P10073 491 aaPredicted RBP7.88□□□□□ -1.15
PTPRF-210ENST00000463041 ODC1P11926 461 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 CPB1P15086 417 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 RFX1P22670 979 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 ALDH1A3P47895 512 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 TAF6P49848 677 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 GUCY2FP51841 1108 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 STARD6P59095 220 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 KCNA1Q09470 495 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 TWF1Q12792 350 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 SMARCB1Q12824 385 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 DUSP4Q13115 394 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 PLD1Q13393 1074 aa7.88□□□□□ -1.15
PTPRF-210ENST00000463041 PRSS36Q5K4E3 855 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms