RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 PPP1R10Q96QC0 940 aaKnown RBP8.53□□□□□ -1.04
SMC3-202ENST00000462899 PDZD7Q9H5P4 517 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 RBM12Q9NTZ6 932 aaKnown RBP8.53□□□□□ -1.04
SMC3-202ENST00000462899 RGL1Q9NZL6 768 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 PARP2Q9UGN5 583 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 DDX25Q9UHL0 483 aaKnown RBP8.53□□□□□ -1.04
SMC3-202ENST00000462899 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 THADAQ6YHU6 1953 aa8.53□□□□□ -1.04
SMC3-202ENST00000462899 MAST4O15021 2626 aa8.52□□□□□ -1.04
SMC3-202ENST00000462899 CCDC163A0A0D9SF12 145 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 TBX3O15119 743 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 DGAT1O75907 488 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 SLITRK3O94933 977 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 SEC24AO95486 1093 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 CPA1P15085 419 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 ATF2P15336 505 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 VIPR2P41587 438 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 TFDP1Q14186 410 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 MRPL58Q14197 206 aaKnown RBP8.52□□□□□ -1.05
SMC3-202ENST00000462899 LRRC32Q14392 662 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 CCDC6Q16204 474 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 UPP1Q16831 310 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 XKR9Q5GH70 373 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 PPP4R3AQ6IN85 833 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 PSAPL1Q6NUJ1 521 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 C1orf228Q6PIY5 440 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 Q6ZUG5 572 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 ANKS3Q6ZW76 656 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 SCUBE3Q8IX30 993 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 BLIDQ8IZY5 108 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 FAM177A1Q8N128 213 aaPredicted RBP8.52□□□□□ -1.05
SMC3-202ENST00000462899 SPIRE2Q8WWL2 714 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 GAB3Q8WWW8 586 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 BRF1Q92994 677 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 DYDC2Q96IM9 177 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 ZC3H10Q96K80 434 aaKnown RBP8.52□□□□□ -1.05
SMC3-202ENST00000462899 CORO1BQ9BR76 489 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 SLC26A6Q9BXS9 759 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 LRRC3Q9BY71 257 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 CCDC113Q9H0I3 377 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 ARRDC1-AS1Q9H2J1 176 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 FZD8Q9H461 694 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 ZSWIM4Q9H7M6 989 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 SNTG2Q9NY99 539 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 PCDHGA5Q9Y5G8 931 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 INSL5Q9Y5Q6 135 aa8.52□□□□□ -1.05
SMC3-202ENST00000462899 TMEM8BA6NDV4 472 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 SRRM3A6NNA2 597 aaPredicted RBP8.51□□□□□ -1.05
SMC3-202ENST00000462899 SOBPA7XYQ1 873 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 HEPACAM2A8MVW5 462 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 ZNF197O14709 1029 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 GIPC1O14908 333 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 CHADO15335 359 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 HMGB1P09429 215 aaKnown RBP8.51□□□□□ -1.05
SMC3-202ENST00000462899 NDUFV2P19404 249 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 CTHP32929 405 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 SOX9P48436 509 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 RARRES1P49788 294 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 CLCNKBP51801 687 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 NLRP5P59047 1200 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 SOX4Q06945 474 aaPredicted RBP8.51□□□□□ -1.05
SMC3-202ENST00000462899 NCBP1Q09161 790 aaKnown RBP8.51□□□□□ -1.05
SMC3-202ENST00000462899 CTTNQ14247 550 aaKnown RBP8.51□□□□□ -1.05
SMC3-202ENST00000462899 KRT32Q14532 448 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 INF2Q27J81 1249 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 DGKKQ5KSL6 1271 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 HEATR6Q6AI08 1181 aaKnown RBP8.51□□□□□ -1.05
SMC3-202ENST00000462899 PKN3Q6P5Z2 889 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 RNF19BQ6ZMZ0 732 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 OTUD6AQ7L8S5 288 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 KBTBD6Q86V97 674 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 TMC8Q8IU68 726 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 CHFRQ96EP1 664 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 LRRC3BQ96PB8 259 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 HSD17B14Q9BPX1 270 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 MKNK1Q9BUB5 465 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 SMOC1Q9H4F8 434 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 C8orf33Q9H7E9 229 aaPredicted RBP8.51□□□□□ -1.05
SMC3-202ENST00000462899 PRMT7Q9NVM4 692 aaPredicted RBP8.51□□□□□ -1.05
SMC3-202ENST00000462899 CEP72Q9P209 647 aa8.51□□□□□ -1.05
SMC3-202ENST00000462899 SLC38A8A6NNN8 435 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 SPECC1L-ADORA2AF8WAN1 911 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 I3L4J1 428 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 TAF4O00268 1085 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 ZNF263O14978 683 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 N4BP3O15049 544 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 AXIN1O15169 862 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 EXTL3O43909 919 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 AKAP3O75969 853 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 VNN2O95498 520 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 TOP3BO95985 862 aaKnown RBP8.5□□□□□ -1.05
SMC3-202ENST00000462899 LRG1P02750 347 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 MPLP40238 635 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 BRCC3P46736 316 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 CYP4A11Q02928 519 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 XKR4Q5GH76 650 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 EEF1DP3Q658K8 133 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 TCEAL6Q6IPX3 200 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 GALNT17Q6IS24 598 aa8.5□□□□□ -1.05
SMC3-202ENST00000462899 LRSAM1Q6UWE0 723 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms