RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 CCT2P78371 535 aaKnown RBP16.76■□□□□ 0.27
APP-211ENST00000462267 KARSQ15046 597 aaKnown RBP16.76■□□□□ 0.27
APP-211ENST00000462267 PTPAQ15257 358 aa16.76■□□□□ 0.27
APP-211ENST00000462267 MCPH1Q8NEM0 835 aa16.76■□□□□ 0.27
APP-211ENST00000462267 ZFYVE19Q96K21 471 aa16.76■□□□□ 0.27
APP-211ENST00000462267 LRRC3BQ96PB8 259 aa16.76■□□□□ 0.27
APP-211ENST00000462267 LRRC3Q9BY71 257 aa16.76■□□□□ 0.27
APP-211ENST00000462267 NCOA5Q9HCD5 579 aaKnown RBP16.76■□□□□ 0.27
APP-211ENST00000462267 TMEM9BQ9NQ34 198 aa16.76■□□□□ 0.27
APP-211ENST00000462267 GPRC5CQ9NQ84 441 aa16.76■□□□□ 0.27
APP-211ENST00000462267 TPCN1Q9ULQ1 816 aa16.76■□□□□ 0.27
APP-211ENST00000462267 SMIM28A0A1B0GU29 152 aa16.75■□□□□ 0.27
APP-211ENST00000462267 A0A1W2PRU2 124 aa16.75■□□□□ 0.27
APP-211ENST00000462267 USO1O60763 962 aaKnown RBP16.75■□□□□ 0.27
APP-211ENST00000462267 PDIA3P30101 505 aaKnown RBP16.75■□□□□ 0.27
APP-211ENST00000462267 PLD1Q13393 1074 aa16.75■□□□□ 0.27
APP-211ENST00000462267 ITPRIPL2Q3MIP1 535 aa16.75■□□□□ 0.27
APP-211ENST00000462267 EEF1DP3Q658K8 133 aa16.75■□□□□ 0.27
APP-211ENST00000462267 ZNF280DQ6N043 979 aa16.75■□□□□ 0.27
APP-211ENST00000462267 APBB1IPQ7Z5R6 666 aaPredicted RBP16.75■□□□□ 0.27
APP-211ENST00000462267 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
APP-211ENST00000462267 SLC38A7Q9NVC3 462 aa16.75■□□□□ 0.27
APP-211ENST00000462267 MSRB2Q9Y3D2 182 aa16.75■□□□□ 0.27
APP-211ENST00000462267 PODXLO00592 558 aa16.74■□□□□ 0.27
APP-211ENST00000462267 KHNYNO15037 678 aaKnown RBP16.74■□□□□ 0.27
APP-211ENST00000462267 EVCP57679 992 aa16.74■□□□□ 0.27
APP-211ENST00000462267 SOX4Q06945 474 aaPredicted RBP16.74■□□□□ 0.27
APP-211ENST00000462267 GRSF1Q12849 480 aaKnown RBP eCLIP16.74■□□□□ 0.27
APP-211ENST00000462267 TMEM196Q5HYL7 178 aa16.74■□□□□ 0.27
APP-211ENST00000462267 BLOC1S2Q6QNY1 142 aa16.74■□□□□ 0.27
APP-211ENST00000462267 MAEAQ7L5Y9 396 aa16.74■□□□□ 0.27
APP-211ENST00000462267 TMC8Q8IU68 726 aa16.74■□□□□ 0.27
APP-211ENST00000462267 PIGOQ8TEQ8 1089 aa16.74■□□□□ 0.27
APP-211ENST00000462267 CCDC113Q9H0I3 377 aa16.74■□□□□ 0.27
APP-211ENST00000462267 YIPF1Q9Y548 306 aa16.74■□□□□ 0.27
APP-211ENST00000462267 NUB1Q9Y5A7 615 aa16.74■□□□□ 0.27
APP-211ENST00000462267 ITPR1Q14643 2758 aa16.74■□□□□ 0.27
APP-211ENST00000462267 WDFY3Q8IZQ1 3526 aa16.74■□□□□ 0.27
APP-211ENST00000462267 CDX4O14627 284 aaPredicted RBP16.73■□□□□ 0.27
APP-211ENST00000462267 CPB1P15086 417 aa16.73■□□□□ 0.27
APP-211ENST00000462267 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
APP-211ENST00000462267 EPHB3P54753 998 aa16.73■□□□□ 0.27
APP-211ENST00000462267 TNK2Q07912 1038 aa16.73■□□□□ 0.27
APP-211ENST00000462267 XKR4Q5GH76 650 aa16.73■□□□□ 0.27
APP-211ENST00000462267 RNF19BQ6ZMZ0 732 aa16.73■□□□□ 0.27
APP-211ENST00000462267 GPIHBP1Q8IV16 184 aa16.73■□□□□ 0.27
APP-211ENST00000462267 APPL2Q8NEU8 664 aa16.73■□□□□ 0.27
APP-211ENST00000462267 BEST2Q8NFU1 509 aa16.73■□□□□ 0.27
APP-211ENST00000462267 BPIFB1Q8TDL5 484 aa16.73■□□□□ 0.27
APP-211ENST00000462267 SUSD3Q96L08 255 aa16.73■□□□□ 0.27
APP-211ENST00000462267 JAKMIP1Q96N16 626 aaKnown RBP16.73■□□□□ 0.27
APP-211ENST00000462267 TOPORSQ9NS56 1045 aaPredicted RBP16.73■□□□□ 0.27
APP-211ENST00000462267 THG1LQ9NWX6 298 aaKnown RBP16.73■□□□□ 0.27
APP-211ENST00000462267 PCDHA12Q9UN75 941 aa16.73■□□□□ 0.27
APP-211ENST00000462267 USP20Q9Y2K6 914 aa16.73■□□□□ 0.27
APP-211ENST00000462267 TRDMT1O14717 391 aaKnown RBP16.72■□□□□ 0.27
APP-211ENST00000462267 HYAL3O43820 417 aaPredicted RBP16.72■□□□□ 0.27
APP-211ENST00000462267 LIG1P18858 919 aa16.72■□□□□ 0.27
APP-211ENST00000462267 ATP2B1P20020 1258 aa16.72■□□□□ 0.27
APP-211ENST00000462267 WEE1P30291 646 aa16.72■□□□□ 0.27
APP-211ENST00000462267 YARSP54577 528 aaKnown RBP16.72■□□□□ 0.27
APP-211ENST00000462267 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
APP-211ENST00000462267 STXBP5Q5T5C0 1151 aa16.72■□□□□ 0.27
APP-211ENST00000462267 FSTL4Q6MZW2 842 aa16.72■□□□□ 0.27
APP-211ENST00000462267 ALKAL1Q6UXT8 129 aa16.72■□□□□ 0.27
APP-211ENST00000462267 C11orf74Q86VG3 221 aa16.72■□□□□ 0.27
APP-211ENST00000462267 MKNK1Q9BUB5 465 aa16.72■□□□□ 0.27
APP-211ENST00000462267 EBF1Q9UH73 591 aa16.72■□□□□ 0.27
APP-211ENST00000462267 CPLX1O14810 134 aa16.71■□□□□ 0.27
APP-211ENST00000462267 DCLK1O15075 740 aa16.71■□□□□ 0.27
APP-211ENST00000462267 FGF19O95750 216 aa16.71■□□□□ 0.27
APP-211ENST00000462267 EDN1P05305 212 aa16.71■□□□□ 0.27
APP-211ENST00000462267 RPS6KB1P23443 525 aa16.71■□□□□ 0.27
APP-211ENST00000462267 NAMPTP43490 491 aa16.71■□□□□ 0.27
APP-211ENST00000462267 SOWAHCQ53LP3 525 aaPredicted RBP16.71■□□□□ 0.27
APP-211ENST00000462267 ARHGAP15Q53QZ3 475 aa16.71■□□□□ 0.27
APP-211ENST00000462267 ATF7IP2Q5U623 682 aa16.71■□□□□ 0.27
APP-211ENST00000462267 KIAA1211LQ6NV74 962 aa16.71■□□□□ 0.27
APP-211ENST00000462267 PIK3AP1Q6ZUJ8 805 aa16.71■□□□□ 0.27
APP-211ENST00000462267 DEFB124Q8NES8 71 aa16.71■□□□□ 0.27
APP-211ENST00000462267 DEPTORQ8TB45 409 aa16.71■□□□□ 0.27
APP-211ENST00000462267 BSNDQ8WZ55 320 aa16.71■□□□□ 0.27
APP-211ENST00000462267 KCNB2Q92953 911 aa16.71■□□□□ 0.27
APP-211ENST00000462267 HHIPQ96QV1 700 aa16.71■□□□□ 0.27
APP-211ENST00000462267 CCDC94Q9BW85 323 aaPredicted RBP16.71■□□□□ 0.27
APP-211ENST00000462267 OXCT2Q9BYC2 517 aaPredicted RBP16.71■□□□□ 0.27
APP-211ENST00000462267 DNAJC25Q9H1X3 360 aa16.71■□□□□ 0.27
APP-211ENST00000462267 SLC32A1Q9H598 525 aa16.71■□□□□ 0.27
APP-211ENST00000462267 KCNJ14Q9UNX9 436 aa16.71■□□□□ 0.27
APP-211ENST00000462267 ASB3Q9Y575 518 aa16.71■□□□□ 0.27
APP-211ENST00000462267 EML5Q05BV3 1969 aa16.7■□□□□ 0.26
APP-211ENST00000462267 RNF40O75150 1001 aa16.7■□□□□ 0.26
APP-211ENST00000462267 APBB3O95704 486 aa16.7■□□□□ 0.26
APP-211ENST00000462267 MARCKSP29966 332 aaPredicted RBP16.7■□□□□ 0.26
APP-211ENST00000462267 GBP1P32455 592 aa16.7■□□□□ 0.26
APP-211ENST00000462267 GRM5P41594 1212 aa16.7■□□□□ 0.26
APP-211ENST00000462267 ALDH1A3P47895 512 aa16.7■□□□□ 0.26
APP-211ENST00000462267 MCM2P49736 904 aa16.7■□□□□ 0.26
APP-211ENST00000462267 EFNA5P52803 228 aa16.7■□□□□ 0.26
APP-211ENST00000462267 AMPD2Q01433 879 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms