RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 MYLIPQ8WY64 445 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 PGBD4Q96DM1 585 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 CCDC120Q96HB5 630 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 KIRREL1Q96J84 757 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 CDK5RAP3Q96JB5 506 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 TMX3Q96JJ7 454 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 FAM193BQ96PV7 902 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-205ENST00000462254 RNF38Q9H0F5 515 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 TAF1DQ9H5J8 278 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-205ENST00000462254 FAM204AQ9H8W3 233 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 LY9Q9HBG7 655 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 CABP5Q9NP86 173 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 CYP26B1Q9NR63 512 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 IL17RBQ9NRM6 502 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 SPTLC3Q9NUV7 552 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 C14orf119Q9NWQ9 140 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 PI4KBQ9UBF8 816 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 B4GALT6Q9UBX8 382 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 TPCN1Q9ULQ1 816 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 TRAF6Q9Y4K3 522 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 PCDHGA9Q9Y5G4 932 aaKnown RBP5.28□□□□□ -1.56
CSMD3-205ENST00000462254 PCDHGA8Q9Y5G5 932 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 PCDHGA7Q9Y5G6 932 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 PCDHGA6Q9Y5G7 932 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 PCDHGA3Q9Y5H0 932 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 PCDHGA2Q9Y5H1 932 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 PCDHA9Q9Y5H5 950 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-205ENST00000462254 MYH7BA7E2Y1 1941 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 ZNFX1Q9P2E3 1918 aaKnown RBP5.28□□□□□ -1.56
CSMD3-205ENST00000462254 A0A0G2JMZ2 1700 aa5.28□□□□□ -1.56
CSMD3-205ENST00000462254 LCTP09848 1927 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 IGKV6D-41A0A0C4DH26 115 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 KLF18A0A0U1RQI7 1052 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 KLHL33A6NCF5 533 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 ZNF503-AS2A6NEH8 195 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 A6NNZ2 444 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 ADM5C9JUS6 153 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 STXBP3O00186 592 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 TRAF5O00463 557 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 AP1G1O43747 822 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 PSPNO60542 156 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 TLR5O60602 858 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 OFD1O75665 1012 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 ZRANB2O95218 330 aaKnown RBP eCLIP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 KCNH1O95259 989 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 CPP00450 1065 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 SCG5P05408 212 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 TSPY3P0CV98 308 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 TSPY8P0CW00 308 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 HSD3B1P14060 373 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 RXRAP19793 462 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 HOXC12P31275 282 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 GUCY1A2P33402 732 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 LIFRP42702 1097 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 MCM2P49736 904 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 KPNA1P52294 538 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 EVCP57679 992 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 POU4F1Q01851 419 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 DUSP4Q13115 394 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 CUL4AQ13619 759 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 BECN1Q14457 450 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 KIR3DS1Q14943 382 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 WTAPQ15007 396 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 ANKRD1Q15327 319 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 PRR16Q569H4 304 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 SLC35F1Q5T1Q4 408 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 APOA5Q6Q788 366 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 MIGA2Q7L4E1 593 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 RASGRP2Q7LDG7 609 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 SGMS1Q86VZ5 419 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 IQCA1Q86XH1 822 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 RAB11FIP4Q86YS3 637 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 FOXP4Q8IVH2 680 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 ZNF444Q8N0Y2 327 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 ABHD4Q8TB40 342 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 DCAF4Q8WV16 495 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 FAM168AQ92567 244 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 DIO2Q92813 273 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 SLC5A5Q92911 643 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 C1orf159Q96HA4 380 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 FCRL2Q96LA5 508 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 CCDC138Q96M89 665 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 NAP1L5Q96NT1 182 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 MYL10Q9BUA6 226 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 RNF32Q9H0A6 362 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 DEFB129Q9H1M3 183 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 RSAD1Q9HA92 442 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 TCP11L1Q9NUJ3 509 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 THG1LQ9NWX6 298 aaKnown RBP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 FNIP2Q9P278 1114 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 HERC5Q9UII4 1024 aaKnown RBP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 FZD1Q9UP38 647 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 LIMCH1Q9UPQ0 1083 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 GPR55Q9Y2T6 319 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-205ENST00000462254 NID2Q14112 1375 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 WDR81Q562E7 1941 aa5.27□□□□□ -1.57
CSMD3-205ENST00000462254 hCG_1642624A0A1W2PR95 340 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms