RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-208ENST00000461841 CCDC151A5D8V7 595 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 NSFP46459 744 aaKnown RBP27.16■■□□□ 1.94
CDH23-208ENST00000461841 SP3Q02447 781 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 ZNF394Q53GI3 561 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 PASD1Q8IV76 773 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 CD302Q8IX05 232 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 BCO2Q9BYV7 579 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 RBM12Q9NTZ6 932 aaKnown RBP27.16■■□□□ 1.94
CDH23-208ENST00000461841 SSTR3P32745 418 aaPredicted RBP27.16■■□□□ 1.94
CDH23-208ENST00000461841 RNASE9P60153 205 aaKnown RBP27.16■■□□□ 1.94
CDH23-208ENST00000461841 NOMO3P69849 1222 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 BRD3Q15059 726 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 SMYD5Q6GMV2 418 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 TMCO3Q6UWJ1 677 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 NT5DC4Q86YG4 428 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 ZNF564Q8TBZ8 553 aaPredicted RBP27.16■■□□□ 1.94
CDH23-208ENST00000461841 FAXDC2Q96IV6 333 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 CXCL16Q9H2A7 254 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 SNTG2Q9NY99 539 aa27.16■■□□□ 1.94
CDH23-208ENST00000461841 DDX3YO15523 660 aaKnown RBP27.15■■□□□ 1.94
CDH23-208ENST00000461841 RARBP10826 455 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 ATICP31939 592 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 GUCY2FP51841 1108 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 CRYBB1P53674 252 aaPredicted RBP27.15■■□□□ 1.94
CDH23-208ENST00000461841 VSNL1P62760 191 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 ZSWIM1Q9BR11 485 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 SELENOOQ9BVL4 669 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 VRTNQ9H8Y1 702 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 PLEKHA5Q9HAU0 1116 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 SPC25Q9HBM1 224 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 RNF186Q9NXI6 227 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 DPP3Q9NY33 737 aa27.15■■□□□ 1.94
CDH23-208ENST00000461841 CEP104O60308 925 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 TUBBP07437 444 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 AXLP30530 894 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 POLR2BP30876 1174 aaKnown RBP27.14■■□□□ 1.94
CDH23-208ENST00000461841 NKX3-2P78367 333 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 NBPF20Q3BBV1 942 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 CC2D1AQ6P1N0 951 aaPredicted RBP27.14■■□□□ 1.94
CDH23-208ENST00000461841 WDR93Q6P2C0 686 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 MON1BQ7L1V2 547 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 USP38Q8NB14 1042 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 ACTRT1Q8TDG2 376 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 KIF12Q96FN5 646 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 ITGA11Q9UKX5 1188 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 HES2Q9Y543 173 aa27.14■■□□□ 1.94
CDH23-208ENST00000461841 TARSL2A2RTX5 802 aaKnown RBP27.14■■□□□ 1.93
CDH23-208ENST00000461841 MESDQ14696 234 aa27.14■■□□□ 1.93
CDH23-208ENST00000461841 TAF2Q6P1X5 1199 aa27.14■■□□□ 1.93
CDH23-208ENST00000461841 AVENQ9NQS1 362 aaPredicted RBP27.14■■□□□ 1.93
CDH23-208ENST00000461841 AGAP1Q9UPQ3 857 aa27.14■■□□□ 1.93
CDH23-208ENST00000461841 SCN10AQ9Y5Y9 1956 aa27.14■■□□□ 1.93
CDH23-208ENST00000461841 MYBL1P10243 752 aa27.13■■□□□ 1.93
CDH23-208ENST00000461841 RRM1P23921 792 aa27.13■■□□□ 1.93
CDH23-208ENST00000461841 RAP1GAPP47736 663 aa27.13■■□□□ 1.93
CDH23-208ENST00000461841 CDH8P55286 799 aa27.13■■□□□ 1.93
CDH23-208ENST00000461841 YWHAEP62258 255 aaKnown RBP27.13■■□□□ 1.93
CDH23-208ENST00000461841 C2CD6Q53TS8 623 aa27.13■■□□□ 1.93
CDH23-208ENST00000461841 TRIM11Q96F44 468 aa27.13■■□□□ 1.93
CDH23-208ENST00000461841 HPDLQ96IR7 371 aa27.13■■□□□ 1.93
CDH23-208ENST00000461841 RPS6KC1Q96S38 1066 aa27.13■■□□□ 1.93
CDH23-208ENST00000461841 GTF2IRD1Q9UHL9 959 aa27.13■■□□□ 1.93
CDH23-208ENST00000461841 PIN4Q9Y237 131 aaKnown RBP27.13■■□□□ 1.93
CDH23-208ENST00000461841 ZRANB2O95218 330 aaKnown RBP eCLIP27.12■■□□□ 1.93
CDH23-208ENST00000461841 REM2Q8IYK8 340 aaPredicted RBP27.12■■□□□ 1.93
CDH23-208ENST00000461841 RASGEF1CQ8N431 466 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 BTBD6Q96KE9 485 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 SNX27Q96L92 541 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 ZMAT2Q96NC0 199 aaKnown RBP27.12■■□□□ 1.93
CDH23-208ENST00000461841 LRRC1Q9BTT6 524 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 SDCBP2Q9H190 292 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 TRIP11Q15643 1979 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 TMEM110-MUSTN1A8MSY1 372 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 ADAMTS4O75173 837 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 SEC31AO94979 1220 aaKnown RBP27.12■■□□□ 1.93
CDH23-208ENST00000461841 ELNP15502 786 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 BRD2P25440 801 aaKnown RBP27.12■■□□□ 1.93
CDH23-208ENST00000461841 CCND3P30281 292 aaPredicted RBP27.12■■□□□ 1.93
CDH23-208ENST00000461841 RBP5P82980 135 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 PHF13Q86YI8 300 aaPredicted RBP27.12■■□□□ 1.93
CDH23-208ENST00000461841 HNRNPLLQ8WVV9 542 aaKnown RBP27.12■■□□□ 1.93
CDH23-208ENST00000461841 TFAP2BQ92481 460 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 TRIM6Q9C030 488 aaPredicted RBP27.12■■□□□ 1.93
CDH23-208ENST00000461841 NXF3Q9H4D5 531 aaKnown RBP27.12■■□□□ 1.93
CDH23-208ENST00000461841 ARFGAP3Q9NP61 516 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 TMEM59LQ9UK28 342 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 CASP8AP2Q9UKL3 1982 aa27.12■■□□□ 1.93
CDH23-208ENST00000461841 COMTP21964 271 aa27.11■■□□□ 1.93
CDH23-208ENST00000461841 DCAF12L1Q5VU92 463 aa27.11■■□□□ 1.93
CDH23-208ENST00000461841 ALKAL1Q6UXT8 129 aa27.11■■□□□ 1.93
CDH23-208ENST00000461841 VCPIP1Q96JH7 1222 aa27.11■■□□□ 1.93
CDH23-208ENST00000461841 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.11■■□□□ 1.93
CDH23-208ENST00000461841 SMYD3Q9H7B4 428 aa27.11■■□□□ 1.93
CDH23-208ENST00000461841 XPNPEP3Q9NQH7 507 aa27.11■■□□□ 1.93
CDH23-208ENST00000461841 DERAQ9Y315 318 aa27.11■■□□□ 1.93
CDH23-208ENST00000461841 YARSP54577 528 aaKnown RBP27.11■■□□□ 1.93
CDH23-208ENST00000461841 HDAC7Q8WUI4 952 aa27.11■■□□□ 1.93
CDH23-208ENST00000461841 ALG3Q92685 438 aa27.11■■□□□ 1.93
CDH23-208ENST00000461841 CELF4Q9BZC1 486 aaKnown RBP27.11■■□□□ 1.93
CDH23-208ENST00000461841 ADAM22Q9P0K1 906 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms