RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 ODC1P11926 461 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 PAX3P23760 479 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 TBXAS1P24557 533 aaPredicted RBP11.48□□□□□ -0.57
CDHR4-203ENST00000460430 PBX1P40424 430 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 RABGGTBP53611 331 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 MFAP3P55082 362 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 LILRA4P59901 499 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 POLR2FP61218 127 aaKnown RBP11.48□□□□□ -0.57
CDHR4-203ENST00000460430 YWHAEP62258 255 aaKnown RBP11.48□□□□□ -0.57
CDHR4-203ENST00000460430 APBA1Q02410 837 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 KLHDC7AQ5VTJ3 777 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 SCARA3Q6AZY7 606 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 DCLRE1AQ6PJP8 1040 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 CHRDL2Q6WN34 429 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 RRAGAQ7L523 313 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 TDHQ8IZJ6 230 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 C3orf58Q8NDZ4 430 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 LMO3Q8TAP4 145 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 IQCDQ96DY2 449 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 SPAG5Q96R06 1193 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 CWH43Q9H720 699 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 VRTNQ9H8Y1 702 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 APOBEC3GQ9HC16 384 aaKnown RBP11.48□□□□□ -0.57
CDHR4-203ENST00000460430 UBE2TQ9NPD8 197 aaPredicted RBP11.48□□□□□ -0.57
CDHR4-203ENST00000460430 POLIQ9UNA4 740 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 DAAM1Q9Y4D1 1078 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 FHOD1Q9Y613 1164 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 TRIP11Q15643 1979 aa11.48□□□□□ -0.57
CDHR4-203ENST00000460430 SF3B1O75533 1304 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDHR4-203ENST00000460430 LCHNA4D1U4 455 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 TMEM189-UBE2V1I3L0A0 370 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 TRAPPC3O43617 180 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 HUS1O60921 280 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 LRRN2O75325 713 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 TADA2AO75478 443 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 GALTP07902 379 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 UCHL3P15374 230 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 BMP8BP34820 402 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 CTNNB1P35222 781 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 PPM1AP35813 382 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 ASPAP45381 313 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 GCNT1Q02742 428 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 CUL2Q13617 745 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 FAM109BQ6ICB4 259 aaPredicted RBP11.47□□□□□ -0.57
CDHR4-203ENST00000460430 IQCEQ6IPM2 695 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 PHLDB3Q6NSJ2 640 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 GJB7Q6PEY0 223 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 KCNT2Q6UVM3 1135 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 ENOSF1Q7L5Y1 443 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 ARHGEF19Q8IW93 802 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 COLGALT1Q8NBJ5 622 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 SPC24Q8NBT2 197 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 APPL2Q8NEU8 664 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 CPLX3Q8WVH0 158 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 TATDN2Q93075 761 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 TMEM169Q96HH4 297 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 ARID3AQ99856 593 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 GANQ9H2C0 597 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 SMYD3Q9H7B4 428 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 SIX2Q9NPC8 291 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 NLRC4Q9NPP4 1024 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 MARCH5Q9NX47 278 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 CEP72Q9P209 647 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 DNAJC12Q9UKB3 198 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 ADAM28Q9UKQ2 775 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 RWDD3Q9Y3V2 267 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 PCDHB12Q9Y5F1 795 aa11.47□□□□□ -0.57
CDHR4-203ENST00000460430 GRXCR1A8MXD5 290 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 NT5C1B-RDH14C9J2C7 533 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 F8W810 466 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 I3L4J1 428 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 CYB561D2O14569 222 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 EPHB6O15197 1021 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 SPTLC1O15269 473 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 TNRC18O15417 2968 aaPredicted RBP11.46□□□□□ -0.57
CDHR4-203ENST00000460430 ITGB1P05556 798 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 CA3P07451 260 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 KRT5P13647 590 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 CD58P19256 250 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 USP8P40818 1118 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 BRCC3P46736 316 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 RAP1GAPP47736 663 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 ELAVL2Q12926 359 aaKnown RBP11.46□□□□□ -0.57
CDHR4-203ENST00000460430 RAB30Q15771 203 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 ARHGAP44Q17R89 818 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 FIGNQ5HY92 759 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 METTL23Q86XA0 190 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 ADGRF2Q8IZF7 708 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 TOP6BLQ8N6T0 577 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 ZNF397Q8NF99 534 aaPredicted RBP11.46□□□□□ -0.57
CDHR4-203ENST00000460430 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
CDHR4-203ENST00000460430 SENP8Q96LD8 212 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 GDAP2Q9NXN4 497 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 SPG21Q9NZD8 308 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 MSRAQ9UJ68 235 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 FBXL5Q9UKA1 691 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 DSEQ9UL01 958 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 PCDHA11Q9Y5I1 949 aa11.46□□□□□ -0.57
CDHR4-203ENST00000460430 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.45□□□□□ -0.58
CDHR4-203ENST00000460430 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms