RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 E2F7Q96AV8 911 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 BICD1Q96G01 975 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 AK8Q96MA6 479 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 PNMA5Q96PV4 448 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 TRPV4Q9HBA0 871 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 ASAH2Q9NR71 780 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 ODF2LQ9ULJ1 636 aa23.45■■□□□ 1.34
CPNE1-220ENST00000458038 UBQLN1Q9UMX0 589 aaKnown RBP23.45■■□□□ 1.34
CPNE1-220ENST00000458038 CXCL8P10145 99 aa23.44■■□□□ 1.34
CPNE1-220ENST00000458038 ABCD1P33897 745 aa23.44■■□□□ 1.34
CPNE1-220ENST00000458038 NCKAP1LP55160 1127 aa23.44■■□□□ 1.34
CPNE1-220ENST00000458038 TWF1Q12792 350 aa23.44■■□□□ 1.34
CPNE1-220ENST00000458038 PUM1Q14671 1186 aaKnown RBP eCLIP23.44■■□□□ 1.34
CPNE1-220ENST00000458038 ZBTB6Q15916 424 aa23.44■■□□□ 1.34
CPNE1-220ENST00000458038 POTEHQ6S545 545 aa23.44■■□□□ 1.34
CPNE1-220ENST00000458038 USP37Q86T82 979 aa23.44■■□□□ 1.34
CPNE1-220ENST00000458038 SECISBP2LQ93073 1101 aaKnown RBP23.44■■□□□ 1.34
CPNE1-220ENST00000458038 KIF12Q96FN5 646 aa23.44■■□□□ 1.34
CPNE1-220ENST00000458038 CEP72Q9P209 647 aa23.44■■□□□ 1.34
CPNE1-220ENST00000458038 VWA3AA6NCI4 1184 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 OR6C75A6NL08 312 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 CCR2P41597 374 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 AARSP49588 968 aaKnown RBP eCLIP23.43■■□□□ 1.34
CPNE1-220ENST00000458038 NRLP54845 237 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 MLLT6P55198 1093 aaPredicted RBP23.43■■□□□ 1.34
CPNE1-220ENST00000458038 PPP2R3AQ06190 1150 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 PPP2R5DQ14738 602 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 RABEP1Q15276 862 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 RNF19BQ6ZMZ0 732 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 HAUS6Q7Z4H7 955 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 MAP4K3Q8IVH8 894 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 RMDN1Q96DB5 314 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 TUBGCP4Q9UGJ1 667 aa23.43■■□□□ 1.34
CPNE1-220ENST00000458038 LIG4P49917 911 aa23.42■■□□□ 1.34
CPNE1-220ENST00000458038 FZD5Q13467 585 aa23.42■■□□□ 1.34
CPNE1-220ENST00000458038 TMEM119Q4V9L6 283 aa23.42■■□□□ 1.34
CPNE1-220ENST00000458038 SEZ6Q53EL9 994 aa23.42■■□□□ 1.34
CPNE1-220ENST00000458038 C1orf228Q6PIY5 440 aa23.42■■□□□ 1.34
CPNE1-220ENST00000458038 MFSD6LQ8IWD5 586 aa23.42■■□□□ 1.34
CPNE1-220ENST00000458038 CD302Q8IX05 232 aa23.42■■□□□ 1.34
CPNE1-220ENST00000458038 ZNF334Q9HCZ1 680 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-220ENST00000458038 PRMT8Q9NR22 394 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-220ENST00000458038 NCDNQ9UBB6 729 aa23.42■■□□□ 1.34
CPNE1-220ENST00000458038 COL4A3Q01955 1670 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 H3BQV1 296 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 OGTO15294 1046 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 LILRB5O75023 590 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 PIGRP01833 764 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 ADRB2P07550 413 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 MYL4P12829 197 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 TYMPP19971 482 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 SDHBP21912 280 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 EPHB3P54753 998 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 GPR17Q13304 367 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 GRM2Q14416 872 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 ARSHQ5FYA8 562 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 VITQ6UXI7 678 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 DGLUCYQ7Z3D6 616 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 CALML4Q96GE6 196 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 MSANTD3Q96H12 275 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 ZSWIM3Q96MP5 696 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 PLIN2Q99541 437 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 RPF1Q9H9Y2 349 aaKnown RBP23.41■■□□□ 1.34
CPNE1-220ENST00000458038 ASB3Q9Y575 518 aa23.41■■□□□ 1.34
CPNE1-220ENST00000458038 SHISA7A6NL88 538 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 ZNF263O14978 683 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 HNRNPDLO14979 420 aaKnown RBP23.4■■□□□ 1.34
CPNE1-220ENST00000458038 MOSPD3O75425 235 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 FGF19O95750 216 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 GDI1P31150 447 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 ALDH1A3P47895 512 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 MYBPC2Q14324 1141 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 DSTYKQ6XUX3 929 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 HS6ST3Q8IZP7 471 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 ZNF687Q8N1G0 1237 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 ZSCAN18Q8TBC5 510 aaPredicted RBP23.4■■□□□ 1.34
CPNE1-220ENST00000458038 HAPLN2Q9GZV7 340 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 EPC1Q9H2F5 836 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 CHRDQ9H2X0 955 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 HSFX1Q9UBD0 423 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 TBX20Q9UMR3 447 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 YIPF1Q9Y548 306 aa23.4■■□□□ 1.34
CPNE1-220ENST00000458038 TICRRQ7Z2Z1 1910 aa23.39■■□□□ 1.34
CPNE1-220ENST00000458038 LACTBL1A8MY62 500 aa23.39■■□□□ 1.33
CPNE1-220ENST00000458038 BMP15O95972 392 aa23.39■■□□□ 1.33
CPNE1-220ENST00000458038 UBA7P41226 1012 aa23.39■■□□□ 1.33
CPNE1-220ENST00000458038 MTAPQ13126 283 aa23.39■■□□□ 1.33
CPNE1-220ENST00000458038 OVOS1Q6IE37 1185 aa23.39■■□□□ 1.33
CPNE1-220ENST00000458038 DCLK2Q8N568 766 aa23.39■■□□□ 1.33
CPNE1-220ENST00000458038 FAM3CQ92520 227 aa23.39■■□□□ 1.33
CPNE1-220ENST00000458038 SLITRK6Q9H5Y7 841 aa23.39■■□□□ 1.33
CPNE1-220ENST00000458038 PARVGQ9HBI0 331 aa23.39■■□□□ 1.33
CPNE1-220ENST00000458038 DLL3Q9NYJ7 618 aa23.39■■□□□ 1.33
CPNE1-220ENST00000458038 NDRG2Q9UN36 371 aaKnown RBP23.39■■□□□ 1.33
CPNE1-220ENST00000458038 ZNF131P52739 623 aa23.38■■□□□ 1.33
CPNE1-220ENST00000458038 ENOX2Q16206 610 aaKnown RBP23.38■■□□□ 1.33
CPNE1-220ENST00000458038 SPATA1Q5VX52 437 aa23.38■■□□□ 1.33
CPNE1-220ENST00000458038 MYCT1Q8N699 235 aa23.38■■□□□ 1.33
CPNE1-220ENST00000458038 REEP2Q9BRK0 252 aa23.38■■□□□ 1.33
CPNE1-220ENST00000458038 DERAQ9Y315 318 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms