RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 ARHGAP42A6NI28 874 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 BTBD19C9JJ37 291 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 PI4K2BG5E9Z4 385 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 LCA5LO95447 670 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 CDC25CP30307 473 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 RPL21P46778 160 aaKnown RBP17.25■□□□□ 0.35
LSS-205ENST00000457828 MOXD1Q6UVY6 613 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 TRMT10CQ7L0Y3 403 aaKnown RBP17.25■□□□□ 0.35
LSS-205ENST00000457828 RNF208Q9H0X6 261 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 POLR2BP30876 1174 aaKnown RBP17.25■□□□□ 0.35
LSS-205ENST00000457828 ITGA8P53708 1063 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 DNAJC3Q13217 504 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 CDR2LQ86X02 465 aaPredicted RBP17.25■□□□□ 0.35
LSS-205ENST00000457828 KRT35Q92764 455 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 IKZF4Q9H2S9 585 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 CDC42EP4Q9H3Q1 356 aaKnown RBP17.25■□□□□ 0.35
LSS-205ENST00000457828 TAS2R14Q9NYV8 317 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.25■□□□□ 0.35
LSS-205ENST00000457828 CLCN3P51790 818 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 BASP1P80723 227 aaKnown RBP17.25■□□□□ 0.35
LSS-205ENST00000457828 METTL7BQ6UX53 244 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 ABCF3Q9NUQ8 709 aa17.25■□□□□ 0.35
LSS-205ENST00000457828 FAM86B1E9PN63 330 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 H3BRB1 525 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 PEX10O60683 326 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 CDH16O75309 829 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 FAM86B2P0C5J1 330 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 NQO1P15559 274 aaKnown RBP17.24■□□□□ 0.35
LSS-205ENST00000457828 POLE2P56282 527 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 RDM1Q8NG50 284 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 TUT1Q9H6E5 874 aaKnown RBP17.24■□□□□ 0.35
LSS-205ENST00000457828 RBAKQ9NYW8 714 aaPredicted RBP17.24■□□□□ 0.35
LSS-205ENST00000457828 TRAF3IP3Q9Y228 551 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 RRN3P2A6NIE6 340 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 DCTN3O75935 186 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 SUPT20HL2P0C7V6 817 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 COPS2P61201 443 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 PYROXD1Q8WU10 500 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 CPA5Q8WXQ8 436 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 OSBPL1AQ9BXW6 950 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 ANKEF1Q9NU02 776 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 A0A0A6YYK5 440 aaPredicted RBP17.24■□□□□ 0.35
LSS-205ENST00000457828 GOLGA8RI6L899 631 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 ZBTB39O15060 712 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 CIITAP33076 1130 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 ADCYAP1R1P41586 468 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 ACOT2P49753 483 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 GPS1Q13098 491 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 SPRYD7Q5W111 196 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 RFX8Q6ZV50 586 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 TRIM50Q86XT4 487 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 ZBED8Q8IZ13 594 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.24■□□□□ 0.354e-7■■□□□ 11.9
LSS-205ENST00000457828 RBM15Q96T37 977 aaKnown RBP eCLIP17.24■□□□□ 0.352e-10■□□□□ 8.4
LSS-205ENST00000457828 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 MRPL47Q9HD33 250 aaKnown RBP17.24■□□□□ 0.35
LSS-205ENST00000457828 TXNDC16Q9P2K2 825 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 ZFP69BQ9UJL9 534 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 ARHGEF37A1IGU5 675 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 INHBAP08476 426 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 TGFB3P10600 412 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 RARGP13631 454 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 RFC5P40937 340 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 KRT39Q6A163 491 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 CCDC110Q8TBZ0 833 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 TTC17Q96AE7 1141 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 ELMO3Q96BJ8 720 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 GPRC5CQ9NQ84 441 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 CYP39A1Q9NYL5 469 aa17.24■□□□□ 0.35
LSS-205ENST00000457828 SGPL1O95470 568 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 PRAMEF19Q5SWL8 479 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 TRIM11Q96F44 468 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 POLR3CQ9BUI4 534 aaPredicted RBP17.23■□□□□ 0.35
LSS-205ENST00000457828 KIFC3Q9BVG8 833 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 HSPBP1Q9NZL4 362 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 SPEF2Q9C093 1822 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 CES2O00748 559 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 ZNF286BP0CG31 522 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 THPOP40225 353 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 PHLDB3Q6NSJ2 640 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 PCSK9Q8NBP7 692 aaKnown RBP17.23■□□□□ 0.35
LSS-205ENST00000457828 ATP8B4Q8TF62 1192 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
LSS-205ENST00000457828 OSBPL7Q9BZF2 842 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 DNM1LO00429 736 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 GPC3P51654 580 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 ACVR2BQ13705 512 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 CASC4Q6P4E1 433 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 CENPUQ71F23 418 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 BEST2Q8NFU1 509 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 KIF12Q96FN5 646 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 TMEM117Q9H0C3 514 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 AGO4Q9HCK5 861 aaKnown RBP17.23■□□□□ 0.35
LSS-205ENST00000457828 CYP26B1Q9NR63 512 aa17.23■□□□□ 0.35
LSS-205ENST00000457828 CFAP69A5D8W1 941 aa17.22■□□□□ 0.35
LSS-205ENST00000457828 RBAK-RBAKDNI3L0D1 243 aa17.22■□□□□ 0.35
LSS-205ENST00000457828 MT-ND3P03897 115 aa17.22■□□□□ 0.35
LSS-205ENST00000457828 ESRRAP11474 423 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms