RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 NSUN3Q9H649 340 aaKnown RBP10.87□□□□□ -0.67
ATG4A-206ENST00000457035 TMEM63CQ9P1W3 806 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 FRMD4BQ9Y2L6 1034 aa10.87□□□□□ -0.67
ATG4A-206ENST00000457035 SF3B1O75533 1304 aaKnown RBP eCLIP10.86□□□□□ -0.673e-8■■■■■ 315.9
ATG4A-206ENST00000457035 NCOR1O75376 2440 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 CETN3O15182 167 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 CSPG5O95196 566 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 CST3P01034 146 aaPredicted RBP10.86□□□□□ -0.67
ATG4A-206ENST00000457035 DLATP10515 647 aaKnown RBP10.86□□□□□ -0.67
ATG4A-206ENST00000457035 COL9A1P20849 921 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 FGFR3P22607 806 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 PSMC2P35998 433 aaKnown RBP10.86□□□□□ -0.67
ATG4A-206ENST00000457035 AARSP49588 968 aaKnown RBP eCLIP10.86□□□□□ -0.67
ATG4A-206ENST00000457035 KCNQ1P51787 676 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 NLRP12P59046 1061 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 DLG4P78352 724 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 ELAVL2Q12926 359 aaKnown RBP10.86□□□□□ -0.67
ATG4A-206ENST00000457035 SMC1AQ14683 1233 aaKnown RBP10.86□□□□□ -0.67
ATG4A-206ENST00000457035 PTPN14Q15678 1187 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 C1orf220Q5T0J3 134 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 CCDC183Q5T5S1 534 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 FAM171A1Q5VUB5 890 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 PLPP4Q5VZY2 271 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 TRAPPC11Q7Z392 1133 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 WDR49Q8IV35 697 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 GPR65Q8IYL9 337 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 SUSD3Q96L08 255 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 B3GALT6Q96L58 329 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 FNBP1Q96RU3 617 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 CGRRF1Q99675 332 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 TSG101Q99816 390 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 MKNK1Q9BUB5 465 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 MTMR12Q9C0I1 747 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 ENTPD7Q9NQZ7 604 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 RAPGEFL1Q9UHV5 662 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 SIX4Q9UIU6 781 aa10.86□□□□□ -0.67
ATG4A-206ENST00000457035 LRRIQ3A6PVS8 624 aaPredicted RBP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 I3L4J1 428 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 M0QZQ0 153 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 IKBKBO14920 756 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 PER2O15055 1255 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 SPTLC1O15269 473 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 TRAPPC3O43617 180 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 C4BPAP04003 597 aaKnown RBP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 TNNI1P19237 187 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 GTF2F1P35269 517 aaKnown RBP eCLIP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 GLUD2P49448 558 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 STX17P56962 302 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 ENPEPQ07075 957 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 HYAL1Q12794 435 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 PAK1Q13153 545 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 MRPL58Q14197 206 aaKnown RBP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 BMS1Q14692 1282 aaKnown RBP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 COL19A1Q14993 1142 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 DPCR1Q3MIW9 517 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 RTP2Q5QGT7 225 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 INTS8Q75QN2 995 aaKnown RBP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 FILIP1Q7Z7B0 1213 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 RBM23Q86U06 439 aaKnown RBP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 FAM186BQ8IYM0 893 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 CSGALNACT2Q8N6G5 542 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 LNX1Q8TBB1 728 aaPredicted RBP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 ANKRD36BP1Q96IX9 119 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 TTPALQ9BTX7 342 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 RXFP1Q9HBX9 757 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 MRPL17Q9NRX2 175 aaKnown RBP10.85□□□□□ -0.67
ATG4A-206ENST00000457035 RWDD2AQ9UIY3 292 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 ITGA11Q9UKX5 1188 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 AGAP1Q9UPQ3 857 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 CTNND2Q9UQB3 1225 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 NUB1Q9Y5A7 615 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 XIRP2A4UGR9 3374 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 PLXNA3P51805 1871 aa10.85□□□□□ -0.67
ATG4A-206ENST00000457035 TTC28Q96AY4 2481 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 BICDL2A1A5D9 508 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 C2CD2LO14523 706 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 SYN3O14994 580 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 TBC1D4O60343 1298 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 CLASP2O75122 1294 aaKnown RBP10.84□□□□□ -0.67
ATG4A-206ENST00000457035 TNNC2P02585 160 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 ITGB3P05106 788 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 CNPP09543 421 aaKnown RBP10.84□□□□□ -0.67
ATG4A-206ENST00000457035 TMEM191BP0C7N4 346 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 PAX3P23760 479 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 TKTP29401 623 aaKnown RBP10.84□□□□□ -0.67
ATG4A-206ENST00000457035 POLR2BP30876 1174 aaKnown RBP10.84□□□□□ -0.67
ATG4A-206ENST00000457035 NRIP1P48552 1158 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 TAF6P49848 677 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 VAMP7P51809 220 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 RBP5P82980 135 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 ADAM15Q13444 863 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 KCNC3Q14003 757 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 DUSP6Q16828 381 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 AAK1Q2M2I8 961 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 CTC1Q2NKJ3 1217 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 KLHL40Q2TBA0 621 aa10.84□□□□□ -0.67
ATG4A-206ENST00000457035 CT47A1Q5JQC4 288 aaPredicted RBP10.84□□□□□ -0.67
ATG4A-206ENST00000457035 KIAA1841Q6NSI8 718 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms