RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ZCCHC9Q8N567 271 aaKnown RBP10.91□□□□□ -0.66
CLIP4-208ENST00000456385 CCDC89Q8N998 374 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 PPFIBP2Q8ND30 876 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 AZIN2Q96A70 460 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 NSL1Q96IY1 281 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 KLF6Q99612 283 aaPredicted RBP10.91□□□□□ -0.66
CLIP4-208ENST00000456385 CBWD1Q9BRT8 395 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 DMAP1Q9NPF5 467 aaPredicted RBP10.91□□□□□ -0.66
CLIP4-208ENST00000456385 ANKFY1Q9P2R3 1169 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 SH3BP1Q9Y3L3 701 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 CDK5RAP2Q96SN8 1893 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 F5H6K3 240 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 TBX3O15119 743 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 ABHD2P08910 425 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 KLRC2P26717 231 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 ADSSP30520 456 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 MAN1A1P33908 653 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 SLC18A1P54219 525 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 KLF1Q13351 362 aaPredicted RBP10.91□□□□□ -0.66
CLIP4-208ENST00000456385 MFSD14BQ5SR56 506 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 MOXD1Q6UVY6 613 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 PDCD7Q8N8D1 485 aaKnown RBP10.91□□□□□ -0.66
CLIP4-208ENST00000456385 DHX38Q92620 1227 aaKnown RBP10.91□□□□□ -0.66
CLIP4-208ENST00000456385 DDX27Q96GQ7 796 aaKnown RBP10.91□□□□□ -0.66
CLIP4-208ENST00000456385 FAM20AQ96MK3 541 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 PLIN4Q96Q06 1357 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 DDX4Q9NQI0 724 aaKnown RBP10.91□□□□□ -0.66
CLIP4-208ENST00000456385 ARMCX1Q9P291 453 aa10.91□□□□□ -0.66
CLIP4-208ENST00000456385 TAF1LQ8IZX4 1826 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 PIK3CDO00329 1044 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 ZWINTO95229 277 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 TROVE2P10155 538 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLIP4-208ENST00000456385 GJC1P36383 396 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 RTP1P59025 263 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 NOP14P78316 857 aaKnown RBP10.9□□□□□ -0.66
CLIP4-208ENST00000456385 CETN1Q12798 172 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 DYNC1I2Q13409 638 aaKnown RBP10.9□□□□□ -0.66
CLIP4-208ENST00000456385 MTM1Q13496 603 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 EFTUD2Q15029 972 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLIP4-208ENST00000456385 ZBED8Q8IZ13 594 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 FBXO27Q8NI29 283 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 RPGRQ92834 1020 aaKnown RBP10.9□□□□□ -0.66
CLIP4-208ENST00000456385 SEMA4DQ92854 862 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 SPATA16Q9BXB7 569 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 TMEM117Q9H0C3 514 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 TMX4Q9H1E5 349 aaPredicted RBP10.9□□□□□ -0.66
CLIP4-208ENST00000456385 KCNK13Q9HB14 408 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 PDP2Q9P2J9 529 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 SLC17A7Q9P2U7 560 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 ATRNL1Q5VV63 1379 aa10.9□□□□□ -0.66
CLIP4-208ENST00000456385 GRIN3BO60391 1043 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 HNRNPCL1O60812 293 aaKnown RBP10.9□□□□□ -0.67
CLIP4-208ENST00000456385 ZNF76P36508 570 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 LMNB2Q03252 620 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 ZBTB16Q05516 673 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 TBC1D10BQ4KMP7 808 aaPredicted RBP10.9□□□□□ -0.67
CLIP4-208ENST00000456385 IZUMO2Q6UXV1 221 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 TDRPQ86YL5 185 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 LINC00116Q8NCU8 138 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 TCP10LQ8TDR4 215 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 SETDB2Q96T68 719 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 FAM192AQ9GZU8 254 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 CD209Q9NNX6 404 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 KLHL11Q9NVR0 708 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 ZNF212Q9UDV6 495 aa10.9□□□□□ -0.67
CLIP4-208ENST00000456385 GOLGA8IPA6NC78 632 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 GOLGA8JA6NMD2 632 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 GOLGA8SH3BPF8 625 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 GOLGA8MH3BSY2 632 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 KCNQ2O43526 872 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 ESRRAP11474 423 aaPredicted RBP10.89□□□□□ -0.67
CLIP4-208ENST00000456385 CD58P19256 250 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 SHMT1P34896 483 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 PGM1P36871 562 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 SREBF1P36956 1147 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 AP3B2Q13367 1082 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 CCNG2Q16589 344 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 ACAD10Q6JQN1 1059 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 OTOP1Q7RTM1 612 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 ANKMY2Q8IV38 441 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 CPA5Q8WXQ8 436 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 DDX1Q92499 740 aaKnown RBP10.89□□□□□ -0.67
CLIP4-208ENST00000456385 CLPTM1LQ96KA5 538 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 FAM161BQ96MY7 647 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 ASCC2Q9H1I8 757 aaPredicted RBP10.89□□□□□ -0.67
CLIP4-208ENST00000456385 PSMC4P43686 418 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 MXI1P50539 228 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 ARFIP2P53365 341 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 TAS2R40P59535 323 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 CENPCQ03188 943 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 PDIA2Q13087 525 aaKnown RBP10.89□□□□□ -0.67
CLIP4-208ENST00000456385 ZRSR2Q15696 482 aaKnown RBP10.89□□□□□ -0.67
CLIP4-208ENST00000456385 KAZNQ674X7 775 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 SLC9A9Q8IVB4 645 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 DAW1Q8N136 415 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 BBOF1Q8ND07 529 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 ZNF398Q8TD17 642 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 SHC3Q92529 594 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 SKA1Q96BD8 255 aa10.89□□□□□ -0.67
CLIP4-208ENST00000456385 OPTNQ96CV9 577 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms