RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 ADD3Q9UEY8 706 aaKnown RBP4.34□□□□□ -1.71
RBM39-220ENST00000455343 EXOC6BQ9Y2D4 811 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 SLC12A7Q9Y666 1083 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 PARP14Q460N5 1801 aa4.34□□□□□ -1.71
RBM39-220ENST00000455343 SPTBN4Q9H254 2564 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 MYH1P12882 1939 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 RAD50Q92878 1312 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 PRR23AA6NEV1 266 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 STXBP3O00186 592 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 AURKAO14965 403 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 PRDM1O75626 825 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 F2P00734 622 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 AMHP03971 560 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 MMP3P08254 477 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 CELA3BP08861 270 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 GLI4P10075 376 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 ATF2P15336 505 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 CASTP20810 708 aaKnown RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 MCCP23508 829 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 HOXC8P31273 242 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 NBL1P41271 181 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 SOX9P48436 509 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 SLURP1P55000 103 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 VCPP55072 806 aaKnown RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 KRTAP10-2P60368 255 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 SNAP25P60880 206 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 RPS6P62753 249 aaKnown RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 PRR5P85299 388 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 ARHGAP1Q07960 439 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 PLEKHG4Q58EX7 1191 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 HSP90AB4PQ58FF6 505 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 ERICH6BQ5W0A0 696 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 ZKSCAN2Q63HK3 967 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 EEF1DP3Q658K8 133 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 KCTD1Q719H9 257 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 FRMD5Q7Z6J6 570 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 SUGP1Q8IWZ8 645 aaKnown RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 ZNF654Q8IZM8 581 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 MYOCDQ8IZQ8 938 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 ZNF444Q8N0Y2 327 aaPredicted RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 CLASRPQ8N2M8 674 aaKnown RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 SMRP1Q8NCR6 262 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 RGS22Q8NE09 1264 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 ADCY4Q8NFM4 1077 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 FNIP1Q8TF40 1166 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 AFG1LQ8WV93 481 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 FRAT1Q92837 279 aaPredicted RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 ATOH1Q92858 354 aaPredicted RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 OSBP2Q969R2 916 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 KIF1BPQ96EK5 621 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 CRBNQ96SW2 442 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 FSD1Q9BTV5 496 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 GBP3Q9H0R5 595 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 LMAN2LQ9H0V9 348 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 RANBP17Q9H2T7 1088 aaKnown RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 BOLA2Q9H3K6 86 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 ZNF287Q9HBT7 754 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 IL17RBQ9NRM6 502 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 CLEC1BQ9P126 229 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 HDAC6Q9UBN7 1215 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 CCPG1Q9ULG6 757 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 PMF1-BGLAPU3KQ54 211 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 SCN10AQ9Y5Y9 1956 aa4.33□□□□□ -1.72
RBM39-220ENST00000455343 ZNFX1Q9P2E3 1918 aaKnown RBP4.33□□□□□ -1.72
RBM39-220ENST00000455343 GBF1Q92538 1859 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 COL4A6Q14031 1691 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 RIF1Q5UIP0 2472 aaKnown RBP4.32□□□□□ -1.72
RBM39-220ENST00000455343 EMSYQ7Z589 1322 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 DMXL1Q9Y485 3027 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 A0A1W2PQH9 124 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 RSPH10B2B2RC85 870 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 H0Y858 1186 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 GRM6O15303 877 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 LINC01565O15544 149 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 EPHX1P07099 455 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 ASGR2P07307 311 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 IFIT2P09913 472 aaKnown RBP4.32□□□□□ -1.72
RBM39-220ENST00000455343 RSPH10BP0C881 870 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 VAMP1P23763 118 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 ICAM3P32942 547 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 GTF2F1P35269 517 aaKnown RBP eCLIP4.32□□□□□ -1.72
RBM39-220ENST00000455343 BMPR1AP36894 532 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 MC3RP41968 323 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 ID4P47928 161 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 GIPRP48546 466 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 KCNC1P48547 511 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 RRP1P56182 461 aaKnown RBP4.32□□□□□ -1.72
RBM39-220ENST00000455343 TFAP4Q01664 338 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 COASYQ13057 564 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 CLUL1Q15846 466 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 LY6KQ17RY6 165 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 GNPTABQ3T906 1256 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 ZSCAN25Q6NSZ9 544 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 SLC30A10Q6XR72 485 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 LIPIQ6XZB0 460 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 EP400NLQ6ZTU2 488 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 RASGRP2Q7LDG7 609 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 SERINC5Q86VE9 423 aa4.32□□□□□ -1.72
RBM39-220ENST00000455343 TET1Q8NFU7 2136 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms