RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 GNA15P30679 374 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 CETN2P41208 172 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 ITGA8P53708 1063 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 HMGCS2P54868 508 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 NOP14P78316 857 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 SP2Q02086 613 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 ICE2Q659A1 982 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 CDCA2Q69YH5 1023 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 KCNV1Q6PIU1 500 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 EXOC3L1Q86VI1 746 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 RCOR2Q8IZ40 523 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 NIPA2Q8N8Q9 360 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 RBBP8NLQ8NC74 664 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 FEZF2Q8TBJ5 459 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 MDM1Q8TC05 714 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 EPS8L3Q8TE67 593 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 SLC7A3Q8WY07 619 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 KLRG1Q96E93 195 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 RBM41Q96IZ5 413 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 WRNIP1Q96S55 665 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 OSBPL8Q9BZF1 889 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 TRIM7Q9C029 511 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 PHACTR1Q9C0D0 580 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 NSRP1Q9H0G5 558 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 CCDC113Q9H0I3 377 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 NRBP2Q9NSY0 501 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 PARVAQ9NVD7 372 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 FBXO40Q9UH90 709 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 ASIC3Q9UHC3 531 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 DRG1Q9Y295 367 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 PTPN22Q9Y2R2 807 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 AFG3L2Q9Y4W6 797 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 PCDHB4Q9Y5E5 795 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 GOLGA6L7A0A1B0GV03 622 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 TMEM191CA6NGB0 347 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 MAFO75444 373 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 OAS1P00973 400 aaKnown RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 CALB1P05937 261 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 TMEM191BP0C7N4 346 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 TGFB3P10600 412 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 GSCP56915 257 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 TAS2R40P59535 323 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 STAT4Q14765 748 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 RASA2Q15283 850 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 UBAP2Q5T6F2 1119 aaKnown RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 HIBCHQ6NVY1 386 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 EXOC8Q8IYI6 725 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 FAM167AQ96KS9 214 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 MSTO1Q9BUK6 570 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 PPCSQ9HAB8 311 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 ANAPC5Q9UJX4 755 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 PCDHGC3Q9UN70 934 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 EFR3BQ9Y2G0 817 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 R3HDM2Q9Y2K5 976 aaKnown RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 NUB1Q9Y5A7 615 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 GSTTP1A0A1W2PQM5 241 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 TLDC2A0PJX2 215 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 CCT8L1PA6NM43 557 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 RALAP11233 206 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 CHKAP35790 457 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 ACOT2P49753 483 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 ALDH5A1P51649 535 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 XRCC4Q13426 336 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 NCOA4Q13772 614 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 RNF187Q5TA31 235 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 FAM160B1Q5W0V3 765 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 VSTM1Q6UX27 236 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 SAMD7Q7Z3H4 446 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 TDRPQ86YL5 185 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 ZCCHC9Q8N567 271 aaKnown RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 ANKS4BQ8N8V4 417 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 ZKSCAN4Q969J2 545 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 PCYT2Q99447 389 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 SELENOSQ9BQE4 189 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 FRMD8P1Q9BZ68 369 aaPredicted RBP13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.29□□□□□ -0.282e-6■■■■■ 96.1
ECHDC1-209ENST00000454591 NINJ2Q9NZG7 142 aa13.29□□□□□ -0.28
ECHDC1-209ENST00000454591 ANK1P16157 1881 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 IGKV6-21A0A0C4DH24 114 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 DNM1LO00429 736 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 ABLIM1O14639 778 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 TOM1L1O75674 476 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 SLC18A1P54219 525 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 NFX1Q12986 1120 aaKnown RBP13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 CAPSQ13938 189 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 NEDD9Q14511 834 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 IER5Q5VY09 327 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 SPOPLQ6IQ16 392 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 TMEM270Q6UE05 265 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 LBX2Q6XYB7 198 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 ANKS1BQ7Z6G8 1248 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 RIOX2Q8IUF8 465 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 LRRC34Q8IZ02 419 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 MAGEC3Q8TD91 643 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 ZNF526Q8TF50 670 aaPredicted RBP13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 ZNF606Q8WXB4 792 aa13.28□□□□□ -0.28
ECHDC1-209ENST00000454591 TMEM143Q96AN5 459 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms