RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 GREB1Q4ZG55 1949 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 HEPACAM2A8MVW5 462 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TISP43B9A030 160 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ABLIM3O94929 683 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ATF2P15336 505 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PSMC3P17980 439 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 U2AF2P26368 475 aaKnown RBP eCLIP6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 RPA1P27694 616 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NMT1P30419 496 aaKnown RBP6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 RPS9P46781 194 aaKnown RBP6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 RBM25P49756 843 aaKnown RBP6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NEK4P51957 841 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PLD1Q13393 1074 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GNL2Q13823 731 aaKnown RBP6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NOLC1Q14978 699 aaKnown RBP eCLIP6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PON2Q15165 354 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PPP2R5AQ15172 486 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 IL17AQ16552 155 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ST3GAL2Q16842 350 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CCDC142Q17RM4 750 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 UVSSAQ2YD98 709 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 HAUS3Q68CZ6 603 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SCARA3Q6AZY7 606 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PDXDC1Q6P996 788 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MPZL3Q6UWV2 235 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MAP4K3Q8IVH8 894 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TCEAL8Q8IYN2 117 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 C4orf32Q8N8J7 132 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ATAD1Q8NBU5 361 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZNF461Q8TAF7 563 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ERMNQ8TAM6 284 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 RIN3Q8TB24 985 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FAM3CQ92520 227 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CHFRQ96EP1 664 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 C8orf76Q96K31 380 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SUSD3Q96L08 255 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 UROC1Q96N76 676 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TCHPQ9BT92 498 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MKNK1Q9BUB5 465 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LRRC3Q9BY71 257 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MRPL4Q9BYD3 311 aaKnown RBP6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 IKZF4Q9H2S9 585 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LMAN1LQ9HAT1 526 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PTPRHQ9HD43 1115 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 KMT5AQ9NQR1 393 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TOPORSQ9NS56 1045 aaPredicted RBP6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GTSE1Q9NYZ3 720 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CNTN3Q9P232 1028 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ARHGAP28Q9P2N2 729 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TNFSF13BQ9Y275 285 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SLC27A5Q9Y2P5 690 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PCDHB6Q9Y5E3 794 aa6.55□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MYO16Q9Y6X6 1858 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ANTXRLA6NF34 631 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 K7ERI5 159 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 K7ESF4 209 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TULP1O00294 542 aaPredicted RBP6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ZNF263O14978 683 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SYN3O14994 580 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 HRO43593 1189 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TRAPPC3O43617 180 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 EXTL3O43909 919 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SEC24BO95487 1268 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 C1RP00736 705 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 NFICP08651 508 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CHRNB1P11230 501 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PTPN2P17706 415 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PROZP22891 400 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CTHP32929 405 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MATR3P43243 847 aaKnown RBP eCLIP6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TOB1P50616 345 aaPredicted RBP6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 KPNA1P52294 538 aaPredicted RBP6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 EFNA5P52803 228 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 DUSP4Q13115 394 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SIM2Q14190 667 aaPredicted RBP6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ANKRD1Q15327 319 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SAFBQ15424 915 aaKnown RBP eCLIP6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SLC10A6Q3KNW5 377 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 XKR4Q5GH76 650 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 CYP4A22Q5TCH4 519 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 TRIM68Q6AZZ1 485 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LAIR1Q6GTX8 287 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 IQCEQ6IPM2 695 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ALKAL1Q6UXT8 129 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 PRR23CQ6ZRP0 262 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 GAREM2Q75VX8 874 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 ELMOD1Q8N336 334 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 FAM160A2Q8N612 972 aaPredicted RBP6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 OR10T2Q8NGX3 314 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 DDX12PQ92771 950 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 KIFAP3Q92845 792 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SECISBP2LQ93073 1101 aaKnown RBP6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 KIF12Q96FN5 646 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SEPT5Q99719 369 aaPredicted RBP6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MMTAG2Q9BU76 263 aaKnown RBP6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 OSBPL6Q9BZF3 934 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 SEMA4GQ9NTN9 838 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 LRWD1Q9UFC0 647 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 RAB23Q9ULC3 237 aa6.54□□□□□ -1.36
HLA-DPA3-207ENST00000454398 MRPS17Q9Y2R5 130 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms