RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 AMPD3Q01432 767 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 CRELD2Q6UXH1 353 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 C15orf39Q6ZRI6 1047 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 ANKS3Q6ZW76 656 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 PACS2Q86VP3 889 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 CD302Q8IX05 232 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 TDRD5Q8NAT2 981 aaKnown RBP10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 CMASQ8NFW8 434 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 HDAC7Q8WUI4 952 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 LEO1Q8WVC0 666 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 SMG7Q92540 1137 aaKnown RBP10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 ZNF707Q96C28 371 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 SAAL1Q96ER3 474 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 SUSD3Q96L08 255 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 PCIF1Q9H4Z3 704 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 MTRRQ9UBK8 725 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 LIMD1Q9UGP4 676 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 SERTAD1Q9UHV2 236 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 FBXW11Q9UKB1 542 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 STYXL1Q9Y6J8 313 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 TSC2P49815 1807 aa10.27□□□□□ -0.77
CDC42EP3-203ENST00000453555 DOCK8Q8NF50 2099 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 A0A1B0GVL5 298 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 H7C4K7 107 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 PPEF2O14830 753 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 SYN3O14994 580 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 CCL16O15467 120 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 C1RP00736 705 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 C8AP07357 584 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 CYP3A5P20815 502 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 LRPAP1P30533 357 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 PRSS12P56730 875 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 KRT85P78386 507 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 ALCAMQ13740 583 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 RAB33AQ14088 237 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 BECN1Q14457 450 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 TMEM132DQ14C87 1099 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 POSTNQ15063 836 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 PPM1LQ5SGD2 360 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 LIN9Q5TKA1 542 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 SPATA1Q5VX52 437 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 DSTYKQ6XUX3 929 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 CCDC149Q6ZUS6 474 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 GRAMD1CQ8IYS0 662 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 BEST2Q8NFU1 509 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 EDAQ92838 391 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 ACSF2Q96CM8 615 aaPredicted RBP10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 C7orf25Q9BPX7 421 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 FAM213AQ9BRX8 229 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 PRKD2Q9BZL6 878 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 ZDHHC7Q9NXF8 308 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 KCNH3Q9ULD8 1083 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 POLIQ9UNA4 740 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 TIMM13Q9Y5L4 95 aaPredicted RBP10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 BACE2Q9Y5Z0 518 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 NOTCH4Q99466 2003 aa10.26□□□□□ -0.77
CDC42EP3-203ENST00000453555 ASGR2P07307 311 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 PFKFB1P16118 471 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 GBP2P32456 591 aaPredicted RBP10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 WNT7BP56706 349 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 ZXDAP98168 799 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 ROR1Q01973 937 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 CUL4BQ13620 913 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 MRPL58Q14197 206 aaKnown RBP10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 PTPN21Q16825 1174 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 CTXN3Q4LDR2 81 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 ARMCX5Q6P1M9 558 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 STXBP4Q6ZWJ1 553 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 GRASPQ7Z6J2 395 aaPredicted RBP10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 EFCAB13Q8IY85 973 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 CEP57L1Q8IYX8 460 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 SLC7A14Q8TBB6 771 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 KCNV2Q8TDN2 545 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 TSPAN18Q96SJ8 248 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 CBWD1Q9BRT8 395 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 SMOC2Q9H3U7 446 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 ASB7Q9H672 318 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 TMEM206Q9H813 350 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 MAGEF1Q9HAY2 307 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 WDR6Q9NNW5 1121 aaKnown RBP10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 FBXL5Q9UKA1 691 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 USTQ9Y2C2 406 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 DERAQ9Y315 318 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 CLUHO75153 1309 aa10.25□□□□□ -0.77
CDC42EP3-203ENST00000453555 WDR27A2RRH5 827 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 PRR33A8MZF0 331 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 C3orf80F5H4A9 247 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 M0QZQ0 153 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 SMAPO00193 183 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 SPTLC1O15269 473 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 ACTN4O43707 911 aaKnown RBP10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 TBC1D4O60343 1298 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 N4BP1O75113 896 aaKnown RBP10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 LDHAP00338 332 aaKnown RBP10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 CPB1P15086 417 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 GARTP22102 1010 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 ELF1P32519 619 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 NTHL1P78549 312 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 FAM26FQ5R3K3 315 aa10.24□□□□□ -0.77
CDC42EP3-203ENST00000453555 C9orf57Q5W0N0 161 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms