RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 ZFP42Q96MM3 310 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 KREMEN1Q96MU8 473 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 STK33Q9BYT3 514 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 NIF3L1Q9GZT8 377 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 XYLT2Q9H1B5 865 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 RSAD1Q9HA92 442 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 APOBEC3GQ9HC16 384 aaKnown RBP13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 UBE2TQ9NPD8 197 aaPredicted RBP13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 MUC6Q6W4X9 2439 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SMIM28A0A1B0GU29 152 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 C9IYK1 514 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 STAU1O95793 577 aaKnown RBP13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 FERP16591 822 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CYP3A5P20815 502 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 IBSPP21815 317 aaPredicted RBP13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TBXAS1P24557 533 aaPredicted RBP13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 RFC2P35250 354 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SOX5P35711 763 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 STAT1P42224 750 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CDK17Q00537 523 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CUL2Q13617 745 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ZBTB6Q15916 424 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SGSM1Q2NKQ1 1148 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TDRD12Q587J7 1177 aaKnown RBP13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SCARA3Q6AZY7 606 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SLC24A5Q71RS6 500 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ZNF598Q86UK7 904 aaKnown RBP13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ZSCAN30Q86W11 494 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TMTC1Q8IUR5 882 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 RNF169Q8NCN4 708 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 DBF4BQ8NFT6 615 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SHC3Q92529 594 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TATDN2Q93075 761 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 C18orf25Q96B23 403 aaPredicted RBP13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PPP1R10Q96QC0 940 aaKnown RBP13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ARID3AQ99856 593 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PRDM12Q9H4Q4 367 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 UBN1Q9NPG3 1134 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 AIPL1Q9NZN9 384 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 NUB1Q9Y5A7 615 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ARL5CA6NH57 179 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 GFPT2O94808 682 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CST3P01034 146 aaPredicted RBP13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SERPING1P05155 500 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ATICP31939 592 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PRKCIP41743 596 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SCNN1GP51170 649 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 GRIK3Q13003 919 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 HGSNATQ68CP4 663 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SCARA5Q6ZMJ2 495 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ZNF560Q96MR9 790 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 GAD1Q99259 594 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PBX4Q9BYU1 374 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 VRTNQ9H8Y1 702 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SLC38A7Q9NVC3 462 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CXXC1Q9P0U4 656 aaPredicted RBP13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ARHGAP20Q9P2F6 1191 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 KIAA1671Q9BY89 1806 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 MYO9BQ13459 2157 aa13.64□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TTC3P53804 2025 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 REV3LO60673 3130 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PPEF2O14830 753 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 INPPL1O15357 1258 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PLEKP08567 350 aaPredicted RBP13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 BMP1P13497 986 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 MSNP26038 577 aaKnown RBP13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ASPAP45381 313 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 RBP5P82980 135 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ARID5AQ03989 594 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SOX4Q06945 474 aaPredicted RBP13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 KLHL30Q0D2K2 578 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ADGRE1Q14246 886 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 MTF1Q14872 753 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 NAB2Q15742 525 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ZNF667Q5HYK9 610 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 C9orf57Q5W0N0 161 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CNKSR3Q6P9H4 555 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 RAD9BQ6WBX8 426 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 DEFB128Q7Z7B8 93 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 RTN4RL1Q86UN2 441 aaPredicted RBP13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 LRRC52Q8N7C0 313 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 UBR7Q8N806 425 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 GSTCDQ8NEC7 633 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 JAKMIP2Q96AA8 810 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CHP1Q99653 195 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 LRFN3Q9BTN0 628 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 GOLGA2P5Q9HBQ8 144 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 RNF19AQ9NV58 838 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TMEM161AQ9NX61 479 aa13.63□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SSU72P8A0A1W2PR75 194 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ANO9A1A5B4 782 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 EOMESO95936 686 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TIMP1P01033 207 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 THP07101 528 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms