RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 DDHD2O94830 711 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 TAF6P49848 677 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 MFAP3P55082 362 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 TNNC1P63316 161 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 CUL2Q13617 745 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 PDXDC1Q6P996 788 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 LRRC43Q8N309 656 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 TC2NQ8N9U0 490 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 ABHD10Q9NUJ1 306 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 LAMA2P24043 3122 aaKnown RBP15.7■□□□□ 0.1
TNF-208ENST00000449264 F8VZ95 297 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 DGKIO75912 1065 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 TBXAS1P24557 533 aaPredicted RBP15.7■□□□□ 0.1
TNF-208ENST00000449264 USP8P40818 1118 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 PNPLA4P41247 253 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 ASPAP45381 313 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 RAP1GAPP47736 663 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 GCNT1Q02742 428 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 DRAP1Q14919 205 aaPredicted RBP15.7■□□□□ 0.1
TNF-208ENST00000449264 UPP1Q16831 310 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 SV2CQ496J9 727 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 C3orf58Q8NDZ4 430 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 HASPINQ8TF76 798 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 MMS19Q96T76 1030 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 STK33Q9BYT3 514 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 EDEM3Q9BZQ6 932 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 SMYD3Q9H7B4 428 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 VRTNQ9H8Y1 702 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 DNAJB4Q9UDY4 337 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 PRG3Q9Y2Y8 225 aaPredicted RBP15.7■□□□□ 0.1
TNF-208ENST00000449264 SNX9Q9Y5X1 595 aa15.7■□□□□ 0.1
TNF-208ENST00000449264 SPTLC1O15269 473 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 P4HA1P13674 534 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 CD58P19256 250 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 IGFBP6P24592 240 aaPredicted RBP15.69■□□□□ 0.1
TNF-208ENST00000449264 RPL9P32969 192 aaKnown RBP15.69■□□□□ 0.1
TNF-208ENST00000449264 OR1G1P47890 313 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 JAM2P57087 298 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 ARID5AQ03989 594 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 DSC1Q08554 894 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 COLGALT2Q8IYK4 626 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 UROC1Q96N76 676 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 YME1L1Q96TA2 773 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 DAAM1Q9Y4D1 1078 aa15.69■□□□□ 0.1
TNF-208ENST00000449264 F8W810 466 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 B3GAT3O94766 335 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 STAU1O95793 577 aaKnown RBP15.68■□□□□ 0.1
TNF-208ENST00000449264 WEE2P0C1S8 567 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 KRT5P13647 590 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 MAGEA10P43363 369 aaPredicted RBP15.68■□□□□ 0.1
TNF-208ENST00000449264 LILRA4P59901 499 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 TSR1Q2NL82 804 aaKnown RBP15.68■□□□□ 0.1
TNF-208ENST00000449264 SFMBT2Q5VUG0 894 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 E4F1Q66K89 784 aaPredicted RBP15.68■□□□□ 0.1
TNF-208ENST00000449264 ENOSF1Q7L5Y1 443 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 OR8K1Q8NGG5 319 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 HERVK_113Q902F9 699 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 DDX27Q96GQ7 796 aaKnown RBP15.68■□□□□ 0.1
TNF-208ENST00000449264 FAM81BQ96LP2 452 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 DNAJC7Q99615 494 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 GPR88Q9GZN0 384 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 NRDE2Q9H7Z3 1164 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 SLC4A7Q9Y6M7 1214 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 KIAA1671Q9BY89 1806 aa15.68■□□□□ 0.1
TNF-208ENST00000449264 KPNA7A9QM74 516 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 GFPT2O94808 682 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 KIF4AO95239 1232 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 PBX3P40426 434 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 STAT1P42224 750 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 SPOUT1Q5T280 376 aaKnown RBP15.67■□□□□ 0.1
TNF-208ENST00000449264 RSPH1Q8WYR4 309 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 SHC3Q92529 594 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 MTIF3Q9H2K0 278 aaKnown RBP15.67■□□□□ 0.1
TNF-208ENST00000449264 TSC2P49815 1807 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 I3L4J1 428 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 FOXN3O00409 490 aaPredicted RBP15.67■□□□□ 0.1
TNF-208ENST00000449264 ITGB1P05556 798 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 SOX5P35711 763 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 CDH8P55286 799 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 BTG3Q14201 252 aaPredicted RBP15.67■□□□□ 0.1
TNF-208ENST00000449264 ASIC2Q16515 512 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 DSTYKQ6XUX3 929 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 PANX2Q96RD6 677 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 ZBED2Q9BTP6 218 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 BCO2Q9BYV7 579 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 SDCBP2Q9H190 292 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 NUCKS1Q9H1E3 243 aaKnown RBP15.67■□□□□ 0.1
TNF-208ENST00000449264 RC3H2Q9HBD1 1191 aaKnown RBP15.67■□□□□ 0.1
TNF-208ENST00000449264 CISHQ9NSE2 258 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 ZNHIT6Q9NWK9 470 aaKnown RBP15.67■□□□□ 0.1
TNF-208ENST00000449264 MYO6Q9UM54 1294 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 PCDHB4Q9Y5E5 795 aa15.67■□□□□ 0.1
TNF-208ENST00000449264 RANBP2P49792 3224 aaKnown RBP15.66■□□□□ 0.1
TNF-208ENST00000449264 GJB5O95377 273 aa15.66■□□□□ 0.1
TNF-208ENST00000449264 BRCC3P46736 316 aa15.66■□□□□ 0.1
TNF-208ENST00000449264 SLC11A1P49279 550 aa15.66■□□□□ 0.1
TNF-208ENST00000449264 C9orf50Q5SZB4 431 aa15.66■□□□□ 0.1
TNF-208ENST00000449264 DCLRE1AQ6PJP8 1040 aa15.66■□□□□ 0.1
TNF-208ENST00000449264 TMEM270Q6UE05 265 aa15.66■□□□□ 0.1
TNF-208ENST00000449264 LRRC8AQ8IWT6 810 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 620.6 ms