RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 WDR93Q6P2C0 686 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 TMEM270Q6UE05 265 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 NT5DC3Q86UY8 548 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 PALB2Q86YC2 1186 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 NME8Q8N427 588 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 RBBP8NLQ8NC74 664 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 SPATA4Q8NEY3 305 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 HNRNPLLQ8WVV9 542 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 KAT2BQ92831 832 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 ACAP3Q96P50 834 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 PCDHB18PQ96TA0 734 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 CCDC94Q9BW85 323 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 ANKZF1Q9H8Y5 726 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 PLEKHA5Q9HAU0 1116 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 SPC25Q9HBM1 224 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 ABCB6Q9NP58 842 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 ARFGAP3Q9NP61 516 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 C2CD2Q9Y426 696 aa11.3□□□□□ -0.6
VIPAS39-203ENST00000448935 KCNK3O14649 394 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 BUB1BO60566 1050 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 CST3P01034 146 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 CYP1A2P05177 515 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 RHOXF2BP0C7M4 288 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 UNGP13051 313 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 COL9A1P20849 921 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 CXCR5P32302 372 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 GRM5P41594 1212 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 NSFP46459 744 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 MYL6P60660 151 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 NOGQ13253 232 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 MAP9Q49MG5 647 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 NOTUMQ6P988 496 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 SLC27A1Q6PCB7 646 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 CATSPER4Q7RTX7 472 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 EFCAB13Q8IY85 973 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 TTC39CQ8N584 583 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 CEP120Q8N960 986 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 NOA1Q8NC60 698 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 ACTRT1Q8TDG2 376 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 ARHGEF26Q96DR7 871 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 HES6Q96HZ4 224 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 VCPIP1Q96JH7 1222 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 RPS6KC1Q96S38 1066 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 PPP1R16BQ96T49 567 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 RHOXF2Q9BQY4 288 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 ADAMTS10Q9H324 1103 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 OSGEPQ9NPF4 335 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 AVENQ9NQS1 362 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 STXBP5LQ9Y2K9 1186 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 DERAQ9Y315 318 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 CASP8AP2Q9UKL3 1982 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 CITO14578 2027 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 MROH7Q68CQ1 1323 aa11.29□□□□□ -0.6
VIPAS39-203ENST00000448935 RALGAPA2Q2PPJ7 1873 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 C17orf102A2RUQ5 167 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 PDE2AO00408 941 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 GPR32O75388 356 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 TFRCP02786 760 aaKnown RBP11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 CYP1A1P04798 512 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 RPLP2P05387 115 aaKnown RBP11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 PSMC4P43686 418 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 ADAM17P78536 824 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 CENPCQ03188 943 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 TMEM132DQ14C87 1099 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 KIZQ2M2Z5 673 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 ZNF667Q5HYK9 610 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 LIN9Q5TKA1 542 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 CDR2LQ86X02 465 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 DNAAF5Q86Y56 855 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 UBL4BQ8N7F7 174 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 UBR7Q8N806 425 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 C7orf31Q8N865 590 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 CPB2Q96IY4 423 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 TSPAN18Q96SJ8 248 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 PSMB7Q99436 277 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 NAP1L3Q99457 506 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 FAM49AQ9H0Q0 323 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 VRTNQ9H8Y1 702 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 ITGA11Q9UKX5 1188 aa11.28□□□□□ -0.6
VIPAS39-203ENST00000448935 LACTBL1A8MY62 500 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 PGRMC1O00264 195 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 THAP12O43422 761 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 LSM8O95777 96 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 STAU1O95793 577 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 KRT19P08727 400 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 DARSP14868 501 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 EIF4BP23588 611 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 ZNF132P52740 706 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 YARSP54577 528 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 GJA9P57773 515 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 TNNC1P63316 161 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 LACTBP83111 547 aaPredicted RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 C2orf54Q08AI8 447 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 JADE1Q6IE81 842 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 CC2D1AQ6P1N0 951 aaPredicted RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 TAF2Q6P1X5 1199 aa11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 ZNF564Q8TBZ8 553 aaPredicted RBP11.27□□□□□ -0.6
VIPAS39-203ENST00000448935 FAM84AQ96KN4 292 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms