RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 DNAJC3Q13217 504 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 KRT72Q14CN4 511 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 ARHGEF6Q15052 776 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 SYCP2LQ5T4T6 812 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 OLFML2BQ68BL8 750 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 MDM1Q8TC05 714 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 RMDN1Q96DB5 314 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 PRPF18Q99633 342 aaKnown RBP8.15□□□□□ -1.1
NEDD9-204ENST00000448183 TASP1Q9H6P5 420 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 L1RE1Q9UN81 338 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 MAGEA13PA6NCF6 341 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 RBP3P10745 1247 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 MYL2P10916 166 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 FDPSP14324 419 aaKnown RBP8.15□□□□□ -1.1
NEDD9-204ENST00000448183 COPB2P35606 906 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 COILP38432 576 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-204ENST00000448183 FNTAP49354 379 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 NLRP11P59045 1033 aaKnown RBP8.15□□□□□ -1.1
NEDD9-204ENST00000448183 TTLL4Q14679 1199 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 SNRNP35Q16560 246 aaKnown RBP8.15□□□□□ -1.1
NEDD9-204ENST00000448183 BTBD8Q5XKL5 378 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 PRPF39Q86UA1 669 aaKnown RBP8.15□□□□□ -1.1
NEDD9-204ENST00000448183 CYGBQ8WWM9 190 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 INPP5DQ92835 1189 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 CROCC2H7BZ55 1655 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 PLA2R1Q13018 1463 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 LOC100653049A0A140TA62 436 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 E7ENQ6 273 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 KRT34O76011 436 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 DEFA1P59665 94 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 DEFA3P59666 94 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 ZNF543Q08ER8 600 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 CRYMQ14894 314 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 KPNB1Q14974 876 aaKnown RBP8.15□□□□□ -1.1
NEDD9-204ENST00000448183 GPR162Q16538 588 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 KLHDC7AQ5VTJ3 777 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 LDHDQ86WU2 507 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 ZNF668Q96K58 619 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-204ENST00000448183 MCEEQ96PE7 176 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 FRMD8Q9BZ67 464 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-204ENST00000448183 ACAD9Q9H845 621 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 PLEKHA5Q9HAU0 1116 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 CD248Q9HCU0 757 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 NDUFA13Q9P0J0 144 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 CDYLQ9Y232 598 aa8.15□□□□□ -1.1
NEDD9-204ENST00000448183 PPP1R3GB7ZBB8 358 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 DFFAO00273 331 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 P4HA2O15460 535 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 LCP1P13796 627 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 DDX5P17844 614 aaKnown RBP8.15□□□□□ -1.11
NEDD9-204ENST00000448183 HSPA13P48723 471 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 MRPL28Q13084 256 aaKnown RBP8.15□□□□□ -1.11
NEDD9-204ENST00000448183 NCOA4Q13772 614 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 TRIM60Q495X7 471 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 AASDHQ4L235 1098 aaPredicted RBP8.15□□□□□ -1.11
NEDD9-204ENST00000448183 TJAP1Q5JTD0 557 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 WLSQ5T9L3 541 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 ARID3BQ8IVW6 561 aaPredicted RBP8.15□□□□□ -1.11
NEDD9-204ENST00000448183 TEKT4Q8WW24 435 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 PTPRN2Q92932 1015 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 SPATA17Q96L03 361 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 RSAD1Q9HA92 442 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 ARHGEF38Q9NXL2 777 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 AFF4Q9UHB7 1163 aaKnown RBP8.15□□□□□ -1.11
NEDD9-204ENST00000448183 REREQ9P2R6 1566 aa8.15□□□□□ -1.11
NEDD9-204ENST00000448183 SYNDIG1LA6NDD5 238 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 NQO1P15559 274 aaKnown RBP8.14□□□□□ -1.11
NEDD9-204ENST00000448183 CPA2P48052 419 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 RUNX1T1Q06455 604 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 RAD51Q06609 339 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 SPP2Q13103 211 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 ITIH4Q14624 930 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 SBK1Q52WX2 424 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 TTC39BQ5VTQ0 682 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-204ENST00000448183 RNF149Q8NC42 400 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 SPATA18Q8TC71 538 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 AFG1LQ8WV93 481 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 VPS33BQ9H267 617 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 NSMCE4AQ9NXX6 385 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 SFMBT1Q9UHJ3 866 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 XPO1O14980 1071 aaKnown RBP8.14□□□□□ -1.11
NEDD9-204ENST00000448183 TLR2O60603 784 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 CST8O60676 142 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 PRKCBP05771 671 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 MYBP10242 640 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 PRLRP16471 622 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 NNMTP40261 264 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 KLK7P49862 253 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 ANTXR2P58335 489 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 BTKQ06187 659 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 MAPK7Q13164 816 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 SGSM1Q2NKQ1 1148 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 XKR3Q5GH77 459 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 SLC13A5Q86YT5 568 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-204ENST00000448183 SUGP1Q8IWZ8 645 aaKnown RBP8.14□□□□□ -1.11
NEDD9-204ENST00000448183 TTLL6Q8N841 843 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 GANCQ8TET4 914 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 CASKIN2Q8WXE0 1202 aa8.14□□□□□ -1.11
NEDD9-204ENST00000448183 NSUN4Q96CB9 384 aaKnown RBP8.14□□□□□ -1.11
NEDD9-204ENST00000448183 GOLPH3Q9H4A6 298 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms