RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 FAM171A1Q5VUB5 890 aa15.28■□□□□ 0.04
SREBF1-207ENST00000447641 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.28■□□□□ 0.04
SREBF1-207ENST00000447641 ZC3H3Q8IXZ2 948 aaKnown RBP15.28■□□□□ 0.04
SREBF1-207ENST00000447641 RDH13Q8NBN7 331 aa15.28■□□□□ 0.04
SREBF1-207ENST00000447641 PIK3R5Q8WYR1 880 aa15.28■□□□□ 0.04
SREBF1-207ENST00000447641 SUSD3Q96L08 255 aa15.28■□□□□ 0.04
SREBF1-207ENST00000447641 TTPALQ9BTX7 342 aa15.28■□□□□ 0.04
SREBF1-207ENST00000447641 PTPRJQ12913 1337 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.04
SREBF1-207ENST00000447641 FSD2A1L4K1 749 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 PPP1R3GB7ZBB8 358 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 M0QZQ0 153 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 PPEF2O14830 753 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 EXOC3O60645 756 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 GLP2RO95838 553 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 C1RP00736 705 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 URODP06132 367 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 CNPP09543 421 aaKnown RBP15.27■□□□□ 0.04
SREBF1-207ENST00000447641 BRCC3P46736 316 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 CASP4P49662 377 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 LILRA4P59901 499 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 TCF15Q12870 199 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 RTP2Q5QGT7 225 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 ISM2Q6H9L7 571 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 FOXR2Q6PJQ5 311 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 RBM23Q86U06 439 aaKnown RBP15.27■□□□□ 0.04
SREBF1-207ENST00000447641 C1orf127Q8N9H9 656 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 TRIML1Q8N9V2 468 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 VN1R2Q8NFZ6 395 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 LNX1Q8TBB1 728 aaPredicted RBP15.27■□□□□ 0.04
SREBF1-207ENST00000447641 PLEKHO2Q8TD55 490 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 SLC22A17Q8WUG5 538 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 CACTINQ8WUQ7 758 aaKnown RBP15.27■□□□□ 0.04
SREBF1-207ENST00000447641 EDAQ92838 391 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 BORCS6Q96GS4 357 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.04
SREBF1-207ENST00000447641 B3GALT6Q96L58 329 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 KLHL5Q96PQ7 755 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 INTS13Q9NVM9 706 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 CLEC1BQ9P126 229 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 FNIP2Q9P278 1114 aa15.27■□□□□ 0.04
SREBF1-207ENST00000447641 SYN3O14994 580 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 SPTLC1O15269 473 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 RPL13P26373 211 aaKnown RBP15.26■□□□□ 0.03
SREBF1-207ENST00000447641 PPP1R2P41236 205 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
SREBF1-207ENST00000447641 TFAMQ00059 246 aaKnown RBP15.26■□□□□ 0.03
SREBF1-207ENST00000447641 ENPEPQ07075 957 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 MRPL58Q14197 206 aaKnown RBP15.26■□□□□ 0.03
SREBF1-207ENST00000447641 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 ANKRD40Q6AI12 368 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 KIAA1841Q6NSI8 718 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 BMP8AQ7Z5Y6 402 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 WDR49Q8IV35 697 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 OR5B17Q8NGF7 314 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 TMC2Q8TDI7 906 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 PARD3BQ8TEW8 1205 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 NOC3LQ8WTT2 800 aaKnown RBP15.26■□□□□ 0.03
SREBF1-207ENST00000447641 RIN2Q8WYP3 895 aaPredicted RBP15.26■□□□□ 0.03
SREBF1-207ENST00000447641 ZNF516Q92618 1163 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 POP1Q99575 1024 aaKnown RBP15.26■□□□□ 0.03
SREBF1-207ENST00000447641 IGFLR1Q9H665 355 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.26■□□□□ 0.03
SREBF1-207ENST00000447641 SIX4Q9UIU6 781 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 CD207Q9UJ71 328 aa15.26■□□□□ 0.03
SREBF1-207ENST00000447641 MTCL1Q9Y4B5 1905 aaKnown RBP15.25■□□□□ 0.03
SREBF1-207ENST00000447641 GOLGA6L3A6NEY3 463 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 I3L4J1 428 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 BIN1O00499 593 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 C2CD2LO14523 706 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 TEX28O15482 410 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 TBC1D4O60343 1298 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 AKAP3O75969 853 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 CCDC192P0DO97 292 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 NR2F2P24468 414 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 CCNE1P24864 410 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 TKTP29401 623 aaKnown RBP15.25■□□□□ 0.03
SREBF1-207ENST00000447641 ADAM9Q13443 819 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 PDXDC1Q6P996 788 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 SMRP1Q8NCR6 262 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 FAM84AQ96KN4 292 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 CGRRF1Q99675 332 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 CLSTN3Q9BQT9 956 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 EMILIN2Q9BXX0 1053 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 MTMR12Q9C0I1 747 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 TMEM63CQ9P1W3 806 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 MTRRQ9UBK8 725 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 ITGA11Q9UKX5 1188 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 PCDHB8Q9UN66 801 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 NUB1Q9Y5A7 615 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 CACNA1HO95180 2353 aa15.25■□□□□ 0.03
SREBF1-207ENST00000447641 DNAH14Q0VDD8 3507 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 TMEM221A6NGB7 291 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 LOC730098B7Z3J9 87 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 M0R296 226 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 PSMA7O14818 248 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 CLCN4P51793 760 aa15.24■□□□□ 0.03
SREBF1-207ENST00000447641 RBM10P98175 930 aaKnown RBP15.24■□□□□ 0.03
SREBF1-207ENST00000447641 CREMQ03060 361 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms