RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 C15orf39Q6ZRI6 1047 aa17.69■□□□□ 0.42
SF3A1-204ENST00000447376 CCDC149Q6ZUS6 474 aa17.69■□□□□ 0.42
SF3A1-204ENST00000447376 C12orf56Q8IXR9 622 aa17.69■□□□□ 0.42
SF3A1-204ENST00000447376 C12orf76Q8N812 135 aaPredicted RBP17.69■□□□□ 0.42
SF3A1-204ENST00000447376 RDH13Q8NBN7 331 aa17.69■□□□□ 0.42
SF3A1-204ENST00000447376 NECAB3Q96P71 396 aaPredicted RBP17.69■□□□□ 0.42
SF3A1-204ENST00000447376 PDE11AQ9HCR9 933 aa17.69■□□□□ 0.42
SF3A1-204ENST00000447376 ZDHHC7Q9NXF8 308 aa17.69■□□□□ 0.42
SF3A1-204ENST00000447376 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
SF3A1-204ENST00000447376 DSEQ9UL01 958 aa17.69■□□□□ 0.42
SF3A1-204ENST00000447376 A0A0C4DFX4 3053 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 KRT19P08727 400 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 SPATA31D3P0C874 917 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 ARPP19P56211 112 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 LILRA4P59901 499 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 ZP2Q05996 745 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 RAB33AQ14088 237 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 PPM1LQ5SGD2 360 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 SPATA31D4Q6ZUB0 917 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 CBWD2Q8IUF1 395 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 KIAA0895Q8NCT3 520 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 CMASQ8NFW8 434 aaPredicted RBP17.68■□□□□ 0.42
SF3A1-204ENST00000447376 SUSD6Q92537 303 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 FRMD4BQ9Y2L6 1034 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 PCDHA5Q9Y5H7 936 aa17.68■□□□□ 0.42
SF3A1-204ENST00000447376 CCDC195A0A1B0GUA6 201 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 ANO9A1A5B4 782 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 PIRO00625 290 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 XYLBO75191 536 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 ITGB3P05106 788 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 CPB1P15086 417 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 TNNI1P19237 187 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 TYMPP19971 482 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 RBP5P82980 135 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 MYO1EQ12965 1108 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 DUOXA2Q1HG44 320 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 OVOS1Q6IE37 1185 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 RTL10Q7L3V2 364 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 GPR149Q86SP6 731 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 WDR49Q8IV35 697 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 EFCAB13Q8IY85 973 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 CSGALNACT2Q8N6G5 542 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 ZSWIM2Q8NEG5 633 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 SMG7Q92540 1137 aaKnown RBP17.67■□□□□ 0.42
SF3A1-204ENST00000447376 RPGRIP1Q96KN7 1286 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 SENP8Q96LD8 212 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 FBXW11Q9UKB1 542 aa17.67■□□□□ 0.42
SF3A1-204ENST00000447376 OR6C75A6NL08 312 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 KPNA7A9QM74 516 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 ZMYND10O75800 440 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 HNRNPA1P09651 372 aaKnown RBP eCLIP17.66■□□□□ 0.42
SF3A1-204ENST00000447376 DLATP10515 647 aaKnown RBP17.66■□□□□ 0.42
SF3A1-204ENST00000447376 IGFBP6P24592 240 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-204ENST00000447376 RPL13P26373 211 aaKnown RBP17.66■□□□□ 0.42
SF3A1-204ENST00000447376 AARSP49588 968 aaKnown RBP eCLIP17.66■□□□□ 0.42
SF3A1-204ENST00000447376 STIM1Q13586 685 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 UVSSAQ2YD98 709 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 ZNF658Q5TYW1 1059 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-204ENST00000447376 TPGS2Q68CL5 300 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 SLC8B1Q6J4K2 584 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 LILRA6Q6PI73 481 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 THEM5Q8N1Q8 247 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 GUF1Q8N442 669 aaKnown RBP17.66■□□□□ 0.42
SF3A1-204ENST00000447376 LRRC52Q8N7C0 313 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 ZNF461Q8TAF7 563 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 SPATA20Q8TB22 786 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 ACSF2Q96CM8 615 aaPredicted RBP17.66■□□□□ 0.42
SF3A1-204ENST00000447376 MTMR12Q9C0I1 747 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 INTS13Q9NVM9 706 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 FBXL5Q9UKA1 691 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 AGAP1Q9UPQ3 857 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 ANK1P16157 1881 aa17.66■□□□□ 0.42
SF3A1-204ENST00000447376 VWA8A3KMH1 1905 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 CYB561D2O14569 222 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 PRRG1O14668 218 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 HUS1O60921 280 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 CLSTN1O94985 981 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 MBD3O95983 291 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 C8AP07357 584 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 POLR2BP30876 1174 aaKnown RBP17.65■□□□□ 0.42
SF3A1-204ENST00000447376 PPP1R2P41236 205 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 ROR1Q01973 937 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 CYP24A1Q07973 514 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 MRPL58Q14197 206 aaKnown RBP17.65■□□□□ 0.42
SF3A1-204ENST00000447376 MYBPC2Q14324 1141 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 PSMD6Q15008 389 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 CAMK4Q16566 473 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 CCDC127Q96BQ5 260 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 CGRRF1Q99675 332 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 MAFFQ9ULX9 164 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 TIMM13Q9Y5L4 95 aaPredicted RBP17.65■□□□□ 0.42
SF3A1-204ENST00000447376 PLXNA3P51805 1871 aa17.65■□□□□ 0.42
SF3A1-204ENST00000447376 PPEF2O14830 753 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 OAZ2O95190 189 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 LRG1P02750 347 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 NR3C1P04150 777 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 WEE2P0C1S8 567 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 HOXA9P31269 272 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 AP3M2P53677 418 aa17.64■□□□□ 0.41
SF3A1-204ENST00000447376 BFSP1Q12934 665 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms