RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TSPAN1O60635 241 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 MYBL1P10243 752 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 PYGMP11217 842 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 CDH8P55286 799 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 CENPCQ03188 943 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 ORC1Q13415 861 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 HLTFQ14527 1009 aaKnown RBP eCLIP10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 DAB2IPQ5VWQ8 1189 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 OLFML2BQ68BL8 750 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 CHADLQ6NUI6 762 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 TRIM72Q6ZMU5 477 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 DDX42Q86XP3 938 aaKnown RBP eCLIP10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 CCDC26Q8TAB7 109 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 TRIM11Q96F44 468 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 ADPGKQ9BRR6 497 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 XYLT2Q9H1B5 865 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 CNTN6Q9UQ52 1028 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 MROH7Q68CQ1 1323 aa10.15□□□□□ -0.78
COL6A4P1-201ENST00000446690 TTI1O43156 1089 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 GJB6O95452 261 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 MYL3P08590 195 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 FAM153BP0C7A2 387 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 SMIM10L2AP0DMW4 78 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 SMIM10L2BP0DMW5 78 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 CD19P15391 556 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 SSR1P43307 286 aaKnown RBP10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 ASPAP45381 313 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 PEX5P50542 639 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 NOMO3P69849 1222 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 LACTBP83111 547 aaPredicted RBP10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 BEX3Q00994 111 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 SLC20A2Q08357 652 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 PAK2Q13177 524 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 SLC10A6Q3KNW5 377 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 FAM153CQ494X1 144 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZNF667Q5HYK9 610 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 SEL1L2Q5TEA6 688 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 RGMBQ6NW40 437 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 MON1BQ7L1V2 547 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 IFNL1Q8IU54 200 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 MSL3Q8N5Y2 521 aaKnown RBP10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 C1orf127Q8N9H9 656 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 ACAP3Q96P50 834 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 UBXN6Q9BZV1 441 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 TRIM31Q9BZY9 425 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 CDHR5Q9HBB8 845 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 FAM153AQ9UHL3 310 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 TTC7AQ9ULT0 858 aaPredicted RBP10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 GNEQ9Y223 722 aaKnown RBP10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 PCDHA3Q9Y5H8 950 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 SIP14410 1827 aa10.15□□□□□ -0.79
COL6A4P1-201ENST00000446690 RRN3P2A6NIE6 340 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 A6NJR5 290 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZNF865P0CJ78 1059 aaPredicted RBP10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 CTNNA1P35221 906 aaKnown RBP10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 RWDD2BP57060 319 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 MAATS1Q7Z4T9 603 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 SAPCD2Q86UD0 394 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 IFNLR1Q8IU57 520 aaPredicted RBP10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 CD101Q93033 1021 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 OSMRQ99650 979 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 VIPAS39Q9H9C1 493 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 ERVK-5Q9HDB9 667 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 VPS18Q9P253 973 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 SIX4Q9UIU6 781 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 USTQ9Y2C2 406 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 PLXNA1Q9UIW2 1896 aa10.14□□□□□ -0.79
COL6A4P1-201ENST00000446690 A0A1B0GUA9 196 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 TNPO2O14787 897 aaKnown RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 NPTXRO95502 500 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 CYP2C9P11712 490 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 HOXD8P13378 290 aaPredicted RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 TNFRSF8P28908 595 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 POLR2BP30876 1174 aaKnown RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 GGCXP38435 758 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZNF132P52740 706 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 MAMLD1Q13495 774 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 MFSD10Q14728 455 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 TMEM132DQ14C87 1099 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 EMBQ6PCB8 327 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 DPH6Q7L8W6 267 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 CATSPER4Q7RTX7 472 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZNF410Q86VK4 478 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 UBR7Q8N806 425 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 C1orf131Q8NDD1 294 aaKnown RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 RIN2Q8WYP3 895 aaPredicted RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 TFAP2BQ92481 460 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 GCOM2Q9BZD3 368 aaPredicted RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 AP5M1Q9H0R1 490 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 DPH5Q9H2P9 285 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 MRPL47Q9HD33 250 aaKnown RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 AVENQ9NQS1 362 aaPredicted RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 AGAP1Q9UPQ3 857 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 UTP11Q9Y3A2 253 aaKnown RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 NRCAMQ92823 1304 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 GOLGA6BA6NDN3 693 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 TULP2O00295 520 aa10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 TLR3O15455 904 aaKnown RBP10.13□□□□□ -0.79
COL6A4P1-201ENST00000446690 GJC1P36383 396 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms