RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 EDEM2Q9BV94 578 aa6.41□□□□□ -1.38
LINC01880-201ENST00000446593 SLC26A6Q9BXS9 759 aa6.41□□□□□ -1.38
LINC01880-201ENST00000446593 RNF26Q9BY78 433 aaPredicted RBP6.41□□□□□ -1.38
LINC01880-201ENST00000446593 TM6SF1Q9BZW5 370 aa6.41□□□□□ -1.38
LINC01880-201ENST00000446593 ASAH2Q9NR71 780 aa6.41□□□□□ -1.38
LINC01880-201ENST00000446593 PRMT7Q9NVM4 692 aaPredicted RBP6.41□□□□□ -1.38
LINC01880-201ENST00000446593 SNTG2Q9NY99 539 aa6.41□□□□□ -1.38
LINC01880-201ENST00000446593 VPS54Q9P1Q0 977 aa6.41□□□□□ -1.38
LINC01880-201ENST00000446593 WRAP73Q9P2S5 460 aaPredicted RBP6.41□□□□□ -1.38
LINC01880-201ENST00000446593 PCDHA4Q9UN74 947 aa6.41□□□□□ -1.38
LINC01880-201ENST00000446593 WASF3Q9UPY6 502 aa6.41□□□□□ -1.38
LINC01880-201ENST00000446593 FANCMQ8IYD8 2048 aa6.41□□□□□ -1.38
LINC01880-201ENST00000446593 SETXQ7Z333 2677 aaKnown RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 FAM187AA6NFU0 413 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 LRRIQ4A6NIV6 560 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 EIF4E1BA6NMX2 242 aaKnown RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 TAF4O00268 1085 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 TULP1O00294 542 aaPredicted RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 GIPC1O14908 333 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 SYN3O14994 580 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 KHNYNO15037 678 aaKnown RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 ZBTB39O15060 712 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 TBX3O15119 743 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 EXTL3O43909 919 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 RECQL4O94761 1208 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 BAG4O95429 457 aaKnown RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 CPA1P15085 419 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 GLRA2P23416 452 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 TKTP29401 623 aaKnown RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 CTHP32929 405 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 SOX9P48436 509 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 PXNP49023 591 aaPredicted RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 AMPD2Q01433 879 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 CREB5Q02930 508 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 GRSF1Q12849 480 aaKnown RBP eCLIP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 PRPF4BQ13523 1007 aaKnown RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 CAPSQ13938 189 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 CTTNQ14247 550 aaKnown RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 KARSQ15046 597 aaKnown RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 PON2Q15165 354 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 RABEP1Q15276 862 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 NAB2Q15742 525 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 UPP1Q16831 310 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 PLK5Q496M5 336 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 ARHGAP29Q52LW3 1261 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 KRT25Q7Z3Z0 450 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 APBB1IPQ7Z5R6 666 aaPredicted RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 ZBTB8OSQ8IWT0 167 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 SLFN12Q8IYM2 578 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 TRIM22Q8IYM9 498 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 BLIDQ8IZY5 108 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 ASAP3Q8TDY4 903 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 EXOC4Q96A65 974 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 DYDC2Q96IM9 177 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 TMEM209Q96SK2 561 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 NAP1L4Q99733 375 aaKnown RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 TMUB1Q9BVT8 246 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 SMOC1Q9H4F8 434 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 SLC32A1Q9H598 525 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 KCNMB3Q9NPA1 279 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 TMEM9BQ9NQ34 198 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 XPNPEP1Q9NQW7 623 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 ANKEF1Q9NU02 776 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 C2orf42Q9NWW7 574 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 THG1LQ9NWX6 298 aaKnown RBP6.4□□□□□ -1.38
LINC01880-201ENST00000446593 RGL1Q9NZL6 768 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 ANKFY1Q9P2R3 1169 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 VAV3Q9UKW4 847 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 TPCN1Q9ULQ1 816 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 NEUROG3Q9Y4Z2 214 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 INSL5Q9Y5Q6 135 aa6.4□□□□□ -1.38
LINC01880-201ENST00000446593 EVPLQ92817 2033 aa6.4□□□□□ -1.39
LINC01880-201ENST00000446593 COL4A3Q01955 1670 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 C2orf16Q68DN1 1984 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 DSPP15924 2871 aaKnown RBP6.39□□□□□ -1.39
LINC01880-201ENST00000446593 BCLAF3A2AJT9 711 aaKnown RBP6.39□□□□□ -1.39
LINC01880-201ENST00000446593 ST8SIA5O15466 376 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 SLC37A4O43826 429 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 CCNT1O60563 726 aaKnown RBP6.39□□□□□ -1.39
LINC01880-201ENST00000446593 SLITRK3O94933 977 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 CD2BP2O95400 341 aaKnown RBP6.39□□□□□ -1.39
LINC01880-201ENST00000446593 SEC24AO95486 1093 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 FGF19O95750 216 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 GCFC2P16383 781 aaKnown RBP6.39□□□□□ -1.39
LINC01880-201ENST00000446593 IFNAR1P17181 557 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 GJA1P17302 382 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 RPS6KB1P23443 525 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 PSMA5P28066 241 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 MCM2P49736 904 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 YARSP54577 528 aaKnown RBP6.39□□□□□ -1.39
LINC01880-201ENST00000446593 EPHA5P54756 1037 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 CYP4A11Q02928 519 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 SSRP1Q08945 709 aaKnown RBP6.39□□□□□ -1.39
LINC01880-201ENST00000446593 TWF1Q12792 350 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 PLD1Q13393 1074 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 TEAD2Q15562 447 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 MAPK6Q16659 721 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 FAM187BQ17R55 369 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 INF2Q27J81 1249 aa6.39□□□□□ -1.39
LINC01880-201ENST00000446593 ITPRIPL2Q3MIP1 535 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms