RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 MTHFRP42898 656 aa25.88■■□□□ 1.73
C9orf3-207ENST00000445181 ZNF658Q5TYW1 1059 aaPredicted RBP25.88■■□□□ 1.73
C9orf3-207ENST00000445181 CLEC17AQ6ZS10 378 aa25.88■■□□□ 1.73
C9orf3-207ENST00000445181 ANKS3Q6ZW76 656 aa25.88■■□□□ 1.73
C9orf3-207ENST00000445181 PALB2Q86YC2 1186 aa25.88■■□□□ 1.73
C9orf3-207ENST00000445181 ANKRD36BP1Q96IX9 119 aa25.88■■□□□ 1.73
C9orf3-207ENST00000445181 RIPOR3Q96MK2 946 aa25.88■■□□□ 1.73
C9orf3-207ENST00000445181 FNBP1Q96RU3 617 aa25.88■■□□□ 1.73
C9orf3-207ENST00000445181 GTPBP4Q9BZE4 634 aaKnown RBP25.88■■□□□ 1.73
C9orf3-207ENST00000445181 GLUD1P00367 558 aa25.87■■□□□ 1.73
C9orf3-207ENST00000445181 NR3C1P04150 777 aa25.87■■□□□ 1.73
C9orf3-207ENST00000445181 DLATP10515 647 aaKnown RBP25.87■■□□□ 1.73
C9orf3-207ENST00000445181 SP100P23497 879 aaPredicted RBP25.87■■□□□ 1.73
C9orf3-207ENST00000445181 CYP24A1Q07973 514 aa25.87■■□□□ 1.73
C9orf3-207ENST00000445181 ATAT1Q5SQI0 421 aa25.87■■□□□ 1.73
C9orf3-207ENST00000445181 LMBRD2Q68DH5 695 aaPredicted RBP25.87■■□□□ 1.73
C9orf3-207ENST00000445181 APPL2Q8NEU8 664 aa25.87■■□□□ 1.73
C9orf3-207ENST00000445181 SPATA20Q8TB22 786 aa25.87■■□□□ 1.73
C9orf3-207ENST00000445181 CCDC127Q96BQ5 260 aa25.87■■□□□ 1.73
C9orf3-207ENST00000445181 POMKQ9H5K3 350 aa25.87■■□□□ 1.73
C9orf3-207ENST00000445181 R3HCC1Q9Y3T6 440 aaKnown RBP25.87■■□□□ 1.73
C9orf3-207ENST00000445181 VWA8A3KMH1 1905 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 PIRO00625 290 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 TNNC2P02585 160 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 LILRA4P59901 499 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 VARS2Q5ST30 1063 aaKnown RBP25.86■■□□□ 1.73
C9orf3-207ENST00000445181 ISM2Q6H9L7 571 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 ELMSAN1Q6PJG2 1045 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 TMC5Q6UXY8 1006 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 SLC9A9Q8IVB4 645 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 EDAQ92838 391 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 MTMR12Q9C0I1 747 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 PCDHB8Q9UN66 801 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 NR2E1Q9Y466 385 aa25.86■■□□□ 1.73
C9orf3-207ENST00000445181 ANO9A1A5B4 782 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 ITGB3P05106 788 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 KRT19P08727 400 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 TNNI1P19237 187 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 PAX3P23760 479 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 TAF6P49848 677 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 PSMD6Q15008 389 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 DUOXA2Q1HG44 320 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 CEP135Q66GS9 1140 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 WDR49Q8IV35 697 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 CSGALNACT2Q8N6G5 542 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 FAM84AQ96KN4 292 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 CLSTN3Q9BQT9 956 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 SFXN1Q9H9B4 322 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 INTS13Q9NVM9 706 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 MTRRQ9UBK8 725 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 DPP7Q9UHL4 492 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 ITGA11Q9UKX5 1188 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 AGAP1Q9UPQ3 857 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 TRAF3IP3Q9Y228 551 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 FRMD4BQ9Y2L6 1034 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 HCN4Q9Y3Q4 1203 aa25.85■■□□□ 1.73
C9orf3-207ENST00000445181 H7C4K7 107 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 M0QZQ0 153 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 SPATA31D3P0C874 917 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 POLR2BP30876 1174 aaKnown RBP25.84■■□□□ 1.73
C9orf3-207ENST00000445181 PRCPP42785 496 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 AARSP49588 968 aaKnown RBP eCLIP25.84■■□□□ 1.73
C9orf3-207ENST00000445181 CAMK4Q16566 473 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 SPATA31D4Q6ZUB0 917 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 USP37Q86T82 979 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 C1orf127Q8N9H9 656 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 ZNF560Q96MR9 790 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 MAN1C1Q9NR34 630 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 DMAC2Q9NW81 257 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 MAN1B1Q9UKM7 699 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 BACE2Q9Y5Z0 518 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 CDY1Q9Y6F8 540 aa25.84■■□□□ 1.73
C9orf3-207ENST00000445181 GOLGA6L22H0YM25 854 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 TGM5O43548 720 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 ODC1P11926 461 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 NR2F2P24468 414 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 RPL13P26373 211 aaKnown RBP25.83■■□□□ 1.73
C9orf3-207ENST00000445181 OR1D2P34982 312 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 PNPLA4P41247 253 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 STIM1Q13586 685 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 MYBPC2Q14324 1141 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 SV2CQ496J9 727 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 CTXN3Q4LDR2 81 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 GPR149Q86SP6 731 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 OR5B17Q8NGF7 314 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 FEZF2Q8TBJ5 459 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 TMEM174Q8WUU8 243 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 SENP8Q96LD8 212 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 MFSD14AQ96MC6 490 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 TIMM13Q9Y5L4 95 aaPredicted RBP25.83■■□□□ 1.73
C9orf3-207ENST00000445181 PTPRJQ12913 1337 aa25.83■■□□□ 1.73
C9orf3-207ENST00000445181 ARHGEF37A1IGU5 675 aa25.82■■□□□ 1.72
C9orf3-207ENST00000445181 SPTLC1O15269 473 aa25.82■■□□□ 1.72
C9orf3-207ENST00000445181 ADAM12O43184 909 aa25.82■■□□□ 1.72
C9orf3-207ENST00000445181 RBP5P82980 135 aa25.82■■□□□ 1.72
C9orf3-207ENST00000445181 ZXDAP98168 799 aa25.82■■□□□ 1.72
C9orf3-207ENST00000445181 YWHAHQ04917 246 aaPredicted RBP25.82■■□□□ 1.72
C9orf3-207ENST00000445181 ZNF280DQ6N043 979 aa25.82■■□□□ 1.72
C9orf3-207ENST00000445181 CGRRF1Q99675 332 aa25.82■■□□□ 1.72
C9orf3-207ENST00000445181 TSG101Q99816 390 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms