RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 ARHGEF35A5YM69 484 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 K7ERI5 159 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 MUTP22033 750 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 PROZP22891 400 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 SOX9P48436 509 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 CCINQ13939 588 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 RALGPS2Q86X27 583 aaPredicted RBP15.77■□□□□ 0.12
HMGN1-208ENST00000443046 TMC8Q8IU68 726 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 DIS3L2Q8IYB7 885 aaKnown RBP15.77■□□□□ 0.12
HMGN1-208ENST00000443046 CSGALNACT1Q8TDX6 532 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 DDX12PQ92771 950 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 KIFAP3Q92845 792 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 C18orf25Q96B23 403 aaPredicted RBP15.77■□□□□ 0.12
HMGN1-208ENST00000443046 IFT74Q96LB3 600 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 LRRC3BQ96PB8 259 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 MKNK1Q9BUB5 465 aa15.77■□□□□ 0.12
HMGN1-208ENST00000443046 CCDC94Q9BW85 323 aaPredicted RBP15.77■□□□□ 0.12
HMGN1-208ENST00000443046 NBEAQ8NFP9 2946 aa15.77■□□□□ 0.11
HMGN1-208ENST00000443046 SLC38A8A6NNN8 435 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 SPECC1L-ADORA2AF8WAN1 911 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 OAZ2O95190 189 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 ZNF806P0C7X5 589 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 CTHP32929 405 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 RAP1GAPP47736 663 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 OSTNP61366 133 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 ECM1Q16610 540 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 HEATR6Q6AI08 1181 aaKnown RBP15.76■□□□□ 0.11
HMGN1-208ENST00000443046 ZNF280DQ6N043 979 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 TAS1R3Q7RTX0 852 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 SYNPOQ8N3V7 929 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 APPL2Q8NEU8 664 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 LOXL4Q96JB6 756 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 TBC1D32Q96NH3 1257 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 DNAJC25Q9H1X3 360 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 TMEM134Q9H6X4 195 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 RXFP3Q9NSD7 469 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 PCDHB8Q9UN66 801 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 NUB1Q9Y5A7 615 aa15.76■□□□□ 0.11
HMGN1-208ENST00000443046 NUP210Q8TEM1 1887 aaPredicted RBP15.76■□□□□ 0.11
HMGN1-208ENST00000443046 DSPP15924 2871 aaKnown RBP15.75■□□□□ 0.11
HMGN1-208ENST00000443046 PHLPP2Q6ZVD8 1323 aa15.75■□□□□ 0.11
HMGN1-208ENST00000443046 AKAP13Q12802 2813 aa15.75■□□□□ 0.11
HMGN1-208ENST00000443046 M0QZQ0 153 aa15.75■□□□□ 0.11
HMGN1-208ENST00000443046 MCF2P10911 925 aa15.75■□□□□ 0.11
HMGN1-208ENST00000443046 IL31Q6EBC2 164 aa15.75■□□□□ 0.11
HMGN1-208ENST00000443046 ACAP3Q96P50 834 aa15.75■□□□□ 0.11
HMGN1-208ENST00000443046 CRISPLD1Q9H336 500 aa15.75■□□□□ 0.11
HMGN1-208ENST00000443046 ARHGAP28Q9P2N2 729 aa15.75■□□□□ 0.11
HMGN1-208ENST00000443046 YIPF1Q9Y548 306 aa15.75■□□□□ 0.11
HMGN1-208ENST00000443046 ZFYVE26Q68DK2 2539 aa15.75■□□□□ 0.11
HMGN1-208ENST00000443046 CCDC163A0A0D9SF12 145 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 A0A1W2PRU2 124 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 EPN2O95208 641 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 WEE1P30291 646 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 MCM7P33993 719 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 NPTX2P47972 431 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 KPNA1P52294 538 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-208ENST00000443046 SF3A2Q15428 464 aaKnown RBP15.74■□□□□ 0.11
HMGN1-208ENST00000443046 ZNF568Q3ZCX4 644 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 PLA2G2CQ5R387 149 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 STXBP5Q5T5C0 1151 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 CEP68Q76N32 757 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 ARID3BQ8IVW6 561 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-208ENST00000443046 YAF2Q8IY57 180 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 DAW1Q8N136 415 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 ERMNQ8TAM6 284 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 TARS2Q9BW92 718 aaKnown RBP15.74■□□□□ 0.11
HMGN1-208ENST00000443046 MRPL4Q9BYD3 311 aaKnown RBP15.74■□□□□ 0.11
HMGN1-208ENST00000443046 ARRDC1-AS1Q9H2J1 176 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 OBP2AQ9NY56 170 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 GTSE1Q9NYZ3 720 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 EML5Q05BV3 1969 aa15.74■□□□□ 0.11
HMGN1-208ENST00000443046 KIF26AQ9ULI4 1882 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-208ENST00000443046 AXIN1O15169 862 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 MCM4P33991 863 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 PON2Q15165 354 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 SLC10A6Q3KNW5 377 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 AASDHQ4L235 1098 aaPredicted RBP15.73■□□□□ 0.11
HMGN1-208ENST00000443046 ARHGAP29Q52LW3 1261 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 STPG1Q5TH74 334 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 GAREM2Q75VX8 874 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 NSUN7Q8NE18 718 aaKnown RBP15.73■□□□□ 0.11
HMGN1-208ENST00000443046 GAB3Q8WWW8 586 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 GTF3C6Q969F1 213 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 LSM14BQ9BX40 385 aaKnown RBP15.73■□□□□ 0.11
HMGN1-208ENST00000443046 OXCT2Q9BYC2 517 aaPredicted RBP15.73■□□□□ 0.11
HMGN1-208ENST00000443046 BHMT2Q9H2M3 363 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 SLITRK6Q9H5Y7 841 aa15.73■□□□□ 0.11
HMGN1-208ENST00000443046 RALYQ9UKM9 306 aaKnown RBP15.73■□□□□ 0.11
HMGN1-208ENST00000443046 IGF2RP11717 2491 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 EXTL3O43909 919 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 OR52Z1P0C646 297 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 CPB1P15086 417 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 AARSP49588 968 aaKnown RBP eCLIP15.72■□□□□ 0.11
HMGN1-208ENST00000443046 PEX3P56589 373 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
HMGN1-208ENST00000443046 GPR17Q13304 367 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 PLD1Q13393 1074 aa15.72■□□□□ 0.11
HMGN1-208ENST00000443046 ORC2Q13416 577 aaPredicted RBP15.72■□□□□ 0.11
HMGN1-208ENST00000443046 ME3Q16798 604 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms