RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 TDO2P48775 406 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 RAB27AP51159 221 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 STAT5BP51692 787 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 ERVPABLB-1P60509 514 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 SPIRE1Q08AE8 756 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 UBE3CQ15386 1083 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 CRY1Q16526 586 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 QRICH1Q2TAL8 776 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 FBXL19Q6PCT2 694 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 ADGRD1Q6QNK2 874 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 SLC36A4Q6YBV0 504 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.14□□□□□ -1.11
SSXP3-201ENST00000442971 SLC41A1Q8IVJ1 513 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 SAMD3Q8N6K7 520 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 METTL13Q8N6R0 699 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 ZNF454Q8N9F8 522 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 ZNF668Q96K58 619 aaPredicted RBP8.14□□□□□ -1.11
SSXP3-201ENST00000442971 P2RY13Q9BPV8 354 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 TMEM47Q9BQJ4 181 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 DONSONQ9NYP3 566 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 ADAM28Q9UKQ2 775 aa8.14□□□□□ -1.11
SSXP3-201ENST00000442971 KNL1Q8NG31 2342 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 ARHGEF37A1IGU5 675 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 DPYSL4O14531 572 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 HBP1O60381 514 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 RFPL3O75679 317 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 RECQL4O94761 1208 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 C1SP09871 688 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 IFIT2P09913 472 aaKnown RBP8.13□□□□□ -1.11
SSXP3-201ENST00000442971 GOLGA8HP0CJ92 632 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 DRD2P14416 443 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 GLDCP23378 1020 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 U2AF2P26368 475 aaKnown RBP eCLIP8.13□□□□□ -1.11
SSXP3-201ENST00000442971 OR1D2P34982 312 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 CD97P48960 835 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 AMPD2Q01433 879 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 DSC1Q08554 894 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 TEAD2Q15562 447 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 HLA-BQ31612 363 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 IL27RAQ6UWB1 636 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 TRIML1Q8N9V2 468 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 PIGOQ8TEQ8 1089 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 MIB2Q96AX9 1013 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 HSPA12BQ96MM6 686 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 AMNQ9BXJ7 453 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.13□□□□□ -1.11
SSXP3-201ENST00000442971 EPB41L4AQ9HCS5 686 aaPredicted RBP8.13□□□□□ -1.11
SSXP3-201ENST00000442971 CUEDC1Q9NWM3 386 aaPredicted RBP8.13□□□□□ -1.11
SSXP3-201ENST00000442971 BCCIPQ9P287 314 aaKnown RBP eCLIP8.13□□□□□ -1.11
SSXP3-201ENST00000442971 FTSJ1Q9UET6 329 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 AKT3Q9Y243 479 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 COL1A2P08123 1366 aa8.13□□□□□ -1.11
SSXP3-201ENST00000442971 OTOL1A6NHN0 477 aaPredicted RBP8.12□□□□□ -1.11
SSXP3-201ENST00000442971 CSDE1O75534 798 aaKnown RBP8.12□□□□□ -1.11
SSXP3-201ENST00000442971 DXOO77932 396 aaKnown RBP8.12□□□□□ -1.11
SSXP3-201ENST00000442971 C22orf31O95567 290 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 SLC3A2P08195 630 aaKnown RBP8.12□□□□□ -1.11
SSXP3-201ENST00000442971 SNHG28P0DPA3 235 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 MYL4P12829 197 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 HNRNPLP14866 589 aaKnown RBP eCLIP8.12□□□□□ -1.11
SSXP3-201ENST00000442971 RUNX3Q13761 415 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 ZNF484Q5JVG2 852 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 GPATCH4Q5T3I0 446 aaKnown RBP8.12□□□□□ -1.11
SSXP3-201ENST00000442971 PPP1R26Q5T8A7 1209 aaPredicted RBP8.12□□□□□ -1.11
SSXP3-201ENST00000442971 NAIF1Q69YI7 327 aaPredicted RBP8.12□□□□□ -1.11
SSXP3-201ENST00000442971 NLRX1Q86UT6 975 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 CEP57Q86XR8 500 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 ADGRF4Q8IZF3 695 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 LSMEM2Q8N112 164 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 CACTIN-AS1Q8N1I8 211 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 EXOC4Q96A65 974 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 TBC1D32Q96NH3 1257 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 GEMIN8Q9NWZ8 242 aaKnown RBP8.12□□□□□ -1.11
SSXP3-201ENST00000442971 ANAPC2Q9UJX6 822 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 MMP17Q9ULZ9 603 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 PCDHB2Q9Y5E7 798 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 CNTNAP2Q9UHC6 1331 aa8.12□□□□□ -1.11
SSXP3-201ENST00000442971 ZBTB42B2RXF5 422 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 SEMA7AO75326 666 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 TADA2AO75478 443 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 DDAH2O95865 285 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 GNAI3P08754 354 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 SLC26A2P50443 739 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 CLCN3P51790 818 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 SF3A1Q15459 793 aaKnown RBP8.11□□□□□ -1.11
SSXP3-201ENST00000442971 SGO2Q562F6 1265 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 SPNS3Q6ZMD2 512 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 USP53Q70EK8 1073 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 WDR63Q8IWG1 891 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 PGBD3Q8N328 593 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 CCDC33Q8N5R6 958 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 LINC01465Q8N7H1 131 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 CCDC26Q8TAB7 109 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 BPIFB1Q8TDL5 484 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 USP33Q8TEY7 942 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 VCPIP1Q96JH7 1222 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 ZFRQ96KR1 1074 aaKnown RBP8.11□□□□□ -1.11
SSXP3-201ENST00000442971 GKN1Q9NS71 199 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 THG1LQ9NWX6 298 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms