RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 PCDHA6Q9UN73 950 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 L1RE1Q9UN81 338 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 PCDHA8Q9Y5H6 950 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 IGSF10Q6WRI0 2623 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 LOC400499M0QZD8 3231 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 CAPN8A6NHC0 703 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 CDX4O14627 284 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-210ENST00000441703 IFIT3O14879 490 aaKnown RBP7.04□□□□□ -1.28
HDAC6-210ENST00000441703 IKBKBO14920 756 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 ATXN7O15265 892 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-210ENST00000441703 ZNF623O75123 536 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 DDAH1O94760 285 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 RHOP08100 348 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 POU2F2P09086 479 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 CEBPBP17676 345 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 ATP4AP20648 1035 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 GBP1P32455 592 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 FAM160A1Q05DH4 1040 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 LMAN2Q12907 356 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 SART3Q15020 963 aaKnown RBP7.04□□□□□ -1.28
HDAC6-210ENST00000441703 UBE2SQ16763 222 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 CEP55Q53EZ4 464 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 AGMOQ6ZNB7 445 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 CCDC73Q6ZRK6 1079 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 TMC6Q7Z403 805 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 CYP2U1Q7Z449 544 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 CATIPQ7Z7H3 387 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 RNF168Q8IYW5 571 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-210ENST00000441703 SYNPOQ8N3V7 929 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 HDDC3Q8N4P3 179 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 AOPEPQ8N6M6 819 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 CEP112Q8N8E3 955 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 ERCC4Q92889 916 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-210ENST00000441703 FAM167AQ96KS9 214 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 ZNF396Q96N95 335 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-210ENST00000441703 LZTS2Q9BRK4 669 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 DUSP15Q9H1R2 295 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-210ENST00000441703 IL25Q9H293 177 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 VIPAS39Q9H9C1 493 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 LY9Q9HBG7 655 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 SENP2Q9HC62 589 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 UBN1Q9NPG3 1134 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 C2orf42Q9NWW7 574 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 VPS18Q9P253 973 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 DNMT3BQ9UBC3 853 aaKnown RBP7.04□□□□□ -1.28
HDAC6-210ENST00000441703 TPCN1Q9ULQ1 816 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 PCDHB2Q9Y5E7 798 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 MAFBQ9Y5Q3 323 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-210ENST00000441703 NOTCH4Q99466 2003 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 SHROOM3Q8TF72 1996 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 AKAP13Q12802 2813 aa7.04□□□□□ -1.28
HDAC6-210ENST00000441703 DMXL2Q8TDJ6 3036 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 A0A1W2PQ27 194 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 A0A1W2PQ64 194 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 A0A1W2PQD8 194 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 CCDC189A1A4V9 331 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 SLC38A8A6NNN8 435 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 TMCO5BA8MYB1 307 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 HIP1O00291 1037 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 MEIS1O00470 390 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 PPP1R12AO14974 1030 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 EXTL3O43909 919 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 ATG13O75143 517 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 TADA2AO75478 443 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 NTRK1P04629 796 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 ITGA4P13612 1032 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 HOXC13P31276 330 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 ADD1P35611 737 aaKnown RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 ZNF76P36508 570 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 ABCG1P45844 678 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 MAPK8P45983 427 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 ATXN3P54252 364 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 MLLT6P55198 1093 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 NLRP12P59046 1061 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 CDC42EP1Q00587 391 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 KCNC4Q03721 635 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 FAM78AQ5JUQ0 283 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 PRSS55Q6UWB4 352 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 CWC27Q6UX04 472 aaKnown RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 VITQ6UXI7 678 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 NIPA1Q7RTP0 329 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 SRGAP1Q7Z6B7 1085 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 RAB44Q7Z6P3 723 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 CEP57Q86XR8 500 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 POTEDQ86YR6 584 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 MAP4K3Q8IVH8 894 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 COLGALT2Q8IYK4 626 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 CTCFLQ8NI51 663 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 CCDC34Q96HJ3 373 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 LLPHQ9BRT6 129 aaKnown RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 NUSAP1Q9BXS6 441 aaKnown RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 GPR62Q9BZJ7 368 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 XPO4Q9C0E2 1151 aaKnown RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 PDE11AQ9HCR9 933 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 IFNKQ9P0W0 207 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 COL4A2P08572 1712 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 LAMA5O15230 3695 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 USP9XQ93008 2570 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-210ENST00000441703 ITPR1Q14643 2758 aa7.03□□□□□ -1.28
HDAC6-210ENST00000441703 SF3B1O75533 1304 aaKnown RBP eCLIP7.02□□□□□ -1.281e-6■■■■■ 66.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms