RNA–Protein interactions for RNA: ENST00000441124.5

HDLBP-218, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-218ENST00000441124 GJB4Q9NTQ9 266 aa20.3■□□□□ 0.84
HDLBP-218ENST00000441124 YIPF1Q9Y548 306 aa20.3■□□□□ 0.84
HDLBP-218ENST00000441124 SRRM3A6NNA2 597 aaPredicted RBP20.29■□□□□ 0.84
HDLBP-218ENST00000441124 CDC45O75419 566 aa20.29■□□□□ 0.84
HDLBP-218ENST00000441124 MCM4P33991 863 aa20.29■□□□□ 0.84
HDLBP-218ENST00000441124 TXKP42681 527 aa20.29■□□□□ 0.84
HDLBP-218ENST00000441124 ARHGAP29Q52LW3 1261 aa20.29■□□□□ 0.84
HDLBP-218ENST00000441124 EARS2Q5JPH6 523 aaKnown RBP20.29■□□□□ 0.84
HDLBP-218ENST00000441124 ATF7IP2Q5U623 682 aa20.29■□□□□ 0.84
HDLBP-218ENST00000441124 DAB2IPQ5VWQ8 1189 aa20.29■□□□□ 0.84
HDLBP-218ENST00000441124 APBB1IPQ7Z5R6 666 aaPredicted RBP20.29■□□□□ 0.84
HDLBP-218ENST00000441124 SKAP1Q86WV1 359 aa20.29■□□□□ 0.84
HDLBP-218ENST00000441124 ZCCHC14Q8WYQ9 949 aaKnown RBP20.29■□□□□ 0.84
HDLBP-218ENST00000441124 KCNB2Q92953 911 aa20.29■□□□□ 0.84
HDLBP-218ENST00000441124 CCDC94Q9BW85 323 aaPredicted RBP20.29■□□□□ 0.84
HDLBP-218ENST00000441124 CCDC113Q9H0I3 377 aa20.29■□□□□ 0.84
HDLBP-218ENST00000441124 SLC38A7Q9NVC3 462 aa20.29■□□□□ 0.84
HDLBP-218ENST00000441124 TMEM8BA6NDV4 472 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 SOBPA7XYQ1 873 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 DTNBO60941 627 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 XBP1P17861 261 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 EVCP57679 992 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 RING1Q06587 406 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 CEP120Q8N960 986 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 LRRC3BQ96PB8 259 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 PGLYRP2Q96PD5 576 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 ATXN3LQ9H3M9 355 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 POLD4Q9HCU8 107 aa20.28■□□□□ 0.84
HDLBP-218ENST00000441124 TOPORSQ9NS56 1045 aaPredicted RBP20.28■□□□□ 0.84
HDLBP-218ENST00000441124 POLR3BQ9NW08 1133 aaPredicted RBP20.28■□□□□ 0.84
HDLBP-218ENST00000441124 ZZEF1O43149 2961 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 CAVIN2O95810 425 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 MARCKSP29966 332 aaPredicted RBP20.27■□□□□ 0.84
HDLBP-218ENST00000441124 HSPA4P34932 840 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 TOB2Q14106 344 aaPredicted RBP20.27■□□□□ 0.84
HDLBP-218ENST00000441124 MRPL58Q14197 206 aaKnown RBP20.27■□□□□ 0.84
HDLBP-218ENST00000441124 ELF2Q15723 593 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 PLK5Q496M5 336 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 NT5DC1Q5TFE4 455 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 LRSAM1Q6UWE0 723 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 HHIPQ96QV1 700 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 TMEM209Q96SK2 561 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 SCNM1Q9BWG6 230 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 SPEGQ15772 3267 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 GREB1Q4ZG55 1949 aa20.27■□□□□ 0.84
HDLBP-218ENST00000441124 CCDC163A0A0D9SF12 145 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 ATG13O75143 517 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 AKAP3O75969 853 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 OR4Q2P0C623 313 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 XRCC6P12956 609 aaKnown RBP eCLIP20.26■□□□□ 0.833e-6■■■■□ 23.5
HDLBP-218ENST00000441124 NAMPTP43490 491 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 EPHB3P54753 998 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 PLD1Q13393 1074 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 GPR158Q5T848 1215 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 KIAA1211LQ6NV74 962 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 APPL2Q8NEU8 664 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 C18orf25Q96B23 403 aaPredicted RBP20.26■□□□□ 0.83
HDLBP-218ENST00000441124 TMEM121BQ9BXQ6 578 aaPredicted RBP20.26■□□□□ 0.83
HDLBP-218ENST00000441124 MAFFQ9ULX9 164 aa20.26■□□□□ 0.83
HDLBP-218ENST00000441124 ARHGEF35A5YM69 484 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 DCLK1O15075 740 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 RHOBTB1O94844 696 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 GRSF1Q12849 480 aaKnown RBP eCLIP20.25■□□□□ 0.83
HDLBP-218ENST00000441124 PPP2R5AQ15172 486 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 ITPRIPL2Q3MIP1 535 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 PADI6Q6TGC4 694 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 TMC8Q8IU68 726 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 DDX12PQ92771 950 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 GATA6Q92908 595 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 ZC3H10Q96K80 434 aaKnown RBP20.25■□□□□ 0.83
HDLBP-218ENST00000441124 SUSD3Q96L08 255 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 IFT74Q96LB3 600 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 ZMAT2Q96NC0 199 aaKnown RBP20.25■□□□□ 0.83
HDLBP-218ENST00000441124 TBC1D32Q96NH3 1257 aa20.25■□□□□ 0.83
HDLBP-218ENST00000441124 GBP1P32455 592 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 GRM5P41594 1212 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 ALDH1A3P47895 512 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 EFNA5P52803 228 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 PLCB2Q00722 1185 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 NR5A1Q13285 461 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 ZNF568Q3ZCX4 644 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 ARHGAP15Q53QZ3 475 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 BPIFB1Q8TDL5 484 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 ZNF274Q96GC6 653 aaPredicted RBP20.24■□□□□ 0.83
HDLBP-218ENST00000441124 LRRC3Q9BY71 257 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 DUSP15Q9H1R2 295 aaPredicted RBP20.24■□□□□ 0.83
HDLBP-218ENST00000441124 CDT1Q9H211 546 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 WASF3Q9UPY6 502 aa20.24■□□□□ 0.83
HDLBP-218ENST00000441124 TIMM13Q9Y5L4 95 aaPredicted RBP20.24■□□□□ 0.83
HDLBP-218ENST00000441124 LNP1A1A4G5 178 aa20.23■□□□□ 0.83
HDLBP-218ENST00000441124 PRAMEF12O95522 483 aa20.23■□□□□ 0.83
HDLBP-218ENST00000441124 SPATA31C1P0DKV0 1188 aa20.23■□□□□ 0.83
HDLBP-218ENST00000441124 HARSP12081 509 aaKnown RBP20.23■□□□□ 0.83
HDLBP-218ENST00000441124 GABRR2P28476 465 aa20.23■□□□□ 0.83
HDLBP-218ENST00000441124 RPL9P32969 192 aaKnown RBP20.23■□□□□ 0.83
HDLBP-218ENST00000441124 DUSP4Q13115 394 aa20.23■□□□□ 0.83
HDLBP-218ENST00000441124 PTPAQ15257 358 aa20.23■□□□□ 0.83
HDLBP-218ENST00000441124 UAP1L1Q3KQV9 507 aa20.23■□□□□ 0.83
HDLBP-218ENST00000441124 FSTL4Q6MZW2 842 aa20.23■□□□□ 0.83
HDLBP-218ENST00000441124 RUFY3Q7L099 469 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms