RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 BTBD6Q96KE9 485 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 CCDC138Q96M89 665 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 SNX2O60749 519 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 DIAPH2O60879 1101 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 TRPA1O75762 1119 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 KLHL2O95198 593 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 TXNP10599 105 aaKnown RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 PGM1P36871 562 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 POLE2P56282 527 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 ACTN3Q08043 901 aaPredicted RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 DCLK2Q8N568 766 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 PPHLN1Q8NEY8 458 aaKnown RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 ZNF526Q8TF50 670 aaPredicted RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 AGAP1Q9UPQ3 857 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 SULT1E1P49888 294 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 SLC29A2Q14542 456 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 ATF7IP2Q5U623 682 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 C4orf50Q6ZRC1 276 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 ICA1LQ8NDH6 482 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 STAMBPL1Q96FJ0 436 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 SLC13A1Q9BZW2 595 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 CNOT7Q9UIV1 285 aaKnown RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 PI4K2BG5E9Z4 385 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 SNRPAP09012 282 aaKnown RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 MCL1Q07820 350 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 NFX1Q12986 1120 aaKnown RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 PCNX4Q63HM2 1172 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 PLA2G4FQ68DD2 849 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 MSL3Q8N5Y2 521 aaKnown RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 KIAA0895Q8NCT3 520 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 O00370 1275 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 PTK7Q13308 1070 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 RARS2Q5T160 578 aaKnown RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 GJB7Q6PEY0 223 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 ZNF720Q7Z2F6 126 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 APPL2Q8NEU8 664 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 RAPGEF5Q92565 580 aa13.54□□□□□ -0.24
BRPF3-203ENST00000441123 G3BP2Q9UN86 482 aaKnown RBP13.54□□□□□ -0.24
BRPF3-203ENST00000441123 GH1P01241 217 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 CYP2C8P10632 490 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 TNFRSF8P28908 595 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 STIP1P31948 543 aaKnown RBP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 HSD17B4P51659 736 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 PDCD2Q16342 344 aaPredicted RBP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 HP1BP3Q5SSJ5 553 aaPredicted RBP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 C2orf69Q8N8R5 385 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 NT5C1AQ9BXI3 368 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 PLEKHA5Q9HAU0 1116 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 NVLO15381 856 aaKnown RBP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 STX3Q13277 289 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 FOXR2Q6PJQ5 311 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 NIPA1Q7RTP0 329 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 DDX42Q86XP3 938 aaKnown RBP eCLIP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 RYBPQ8N488 228 aaPredicted RBP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 MAGEB18Q96M61 343 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 SLC8A2Q9UPR5 921 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 RASSF10A6NK89 507 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 MTSS1O43312 755 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 HBP1O60381 514 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 LSM8O95777 96 aaKnown RBP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 NAMPTP43490 491 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 ACTR2P61160 394 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 KIAA1841Q6NSI8 718 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 APBB2Q92870 758 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 LACRTQ9GZZ8 138 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 SMYD3Q9H7B4 428 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 CASZ1Q86V15 1759 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 APOEP02649 317 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 TPI1P60174 286 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 FKBP1AP62942 108 aaKnown RBP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 PID1Q7Z2X4 250 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 LONP2Q86WA8 852 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 APLFQ8IW19 511 aaPredicted RBP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 C4orf19Q8IY42 314 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 ASAP3Q8TDY4 903 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 CMTM5Q96DZ9 223 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 TSPAN17Q96FV3 270 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
BRPF3-203ENST00000441123 IL17RBQ9NRM6 502 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 PRKAG2Q9UGJ0 569 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 KIAA1257Q9ULG3 409 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 TFR2Q9UP52 801 aa13.53□□□□□ -0.24
BRPF3-203ENST00000441123 FOXN3O00409 490 aaPredicted RBP13.52□□□□□ -0.24
BRPF3-203ENST00000441123 PFDN1O60925 122 aa13.52□□□□□ -0.24
BRPF3-203ENST00000441123 AARSP49588 968 aaKnown RBP eCLIP13.52□□□□□ -0.24
BRPF3-203ENST00000441123 PHEXP78562 749 aa13.52□□□□□ -0.24
BRPF3-203ENST00000441123 GPAT2Q6NUI2 795 aa13.52□□□□□ -0.24
BRPF3-203ENST00000441123 ZNF571Q7Z3V5 609 aaPredicted RBP13.52□□□□□ -0.24
BRPF3-203ENST00000441123 CD302Q8IX05 232 aa13.52□□□□□ -0.24
BRPF3-203ENST00000441123 MICALL2Q8IY33 904 aa13.52□□□□□ -0.24
BRPF3-203ENST00000441123 C9orf72Q96LT7 481 aa13.52□□□□□ -0.24
BRPF3-203ENST00000441123 VPS33BQ9H267 617 aa13.52□□□□□ -0.24
BRPF3-203ENST00000441123 TMX2Q9Y320 296 aa13.52□□□□□ -0.24
BRPF3-203ENST00000441123 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.52□□□□□ -0.24
BRPF3-203ENST00000441123 RIC1Q4ADV7 1423 aa13.52□□□□□ -0.24
BRPF3-203ENST00000441123 KYNUQ16719 465 aa13.52□□□□□ -0.24
BRPF3-203ENST00000441123 POTEAQ6S8J7 498 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms