RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 PCYT2Q99447 389 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 GPR20Q99678 358 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 NFKBIZQ9BYH8 718 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 CCDC113Q9H0I3 377 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 SMARCAD1Q9H4L7 1026 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 GDF3Q9NR23 364 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 CTTNBP2NLQ9P2B4 639 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 HPCAL4Q9UM19 191 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 BRWD1Q9NSI6 2320 aa9.78□□□□□ -0.84
HDAC6-209ENST00000440653 EPG5Q9HCE0 2579 aa9.77□□□□□ -0.84
HDAC6-209ENST00000440653 CCDC66A2RUB6 948 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 ASAP2O43150 1006 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 CEP104O60308 925 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 HBP1O60381 514 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 TIMP1P01033 207 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 HLA-DRAP01903 254 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 CYP1A2P05177 515 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 CYBAP13498 195 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 CSF2RAP15509 400 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 TNNI1P19237 187 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 POU3F3P20264 500 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-209ENST00000440653 ABCB4P21439 1286 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 USP8P40818 1118 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 MATR3P43243 847 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC6-209ENST00000440653 YWHAEP62258 255 aaKnown RBP9.77□□□□□ -0.85
HDAC6-209ENST00000440653 FMO1Q01740 532 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 POU5F1BQ06416 359 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 TCF15Q12870 199 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 BIRC3Q13489 604 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 DHX34Q14147 1143 aaKnown RBP9.77□□□□□ -0.85
HDAC6-209ENST00000440653 TERF2Q15554 542 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 MAPK6Q16659 721 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 KYAT1Q16773 422 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 SEL1L2Q5TEA6 688 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 PPP2R2DQ66LE6 453 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 MAATS1Q7Z4T9 603 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 NOP9Q86U38 636 aaKnown RBP9.77□□□□□ -0.85
HDAC6-209ENST00000440653 EFCAB13Q8IY85 973 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 CCDC26Q8TAB7 109 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 SLC20A1Q8WUM9 679 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 GLG1Q92896 1179 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 EXOC4Q96A65 974 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 EMID1Q96A84 441 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-209ENST00000440653 TMEM143Q96AN5 459 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 ZNF653Q96CK0 615 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 FGD4Q96M96 766 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 LRRC1Q9BTT6 524 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 FAM129AQ9BZQ8 928 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 RAB17Q9H0T7 212 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 THAP2Q9H0W7 228 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 WNT8AQ9H1J5 351 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 PSD3Q9NYI0 1048 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 ANKFY1Q9P2R3 1169 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 RASAL2Q9UJF2 1139 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 PCDHB2Q9Y5E7 798 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 CFAP47Q6ZTR5 3102 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 PKD1L2Q7Z442 2459 aa9.77□□□□□ -0.85
HDAC6-209ENST00000440653 GOLGA6BA6NDN3 693 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 OGTO15294 1046 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 DCXO43602 365 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 OPA1O60313 960 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 IL18RAPO95256 599 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 FTLP02792 175 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 PRKCBP05771 671 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 CLTAP09496 248 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 IL9P15248 144 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 CTNNA2P26232 953 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 NLRP11P59045 1033 aaKnown RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 NOP14P78316 857 aaKnown RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 CENPCQ03188 943 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 MCL1Q07820 350 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 PPIGQ13427 754 aaKnown RBP eCLIP9.76□□□□□ -0.851e-7■■■□□ 17.5
HDAC6-209ENST00000440653 PRPF4BQ13523 1007 aaKnown RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 CUL2Q13617 745 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 CLEC16AQ2KHT3 1053 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 ZNF484Q5JVG2 852 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 TDRD10Q5VZ19 366 aaKnown RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 ALS2CLQ60I27 953 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 MFSD5Q6N075 450 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 CCDC62Q6P9F0 684 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 TRMT1LQ7Z2T5 733 aaKnown RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 DHX37Q8IY37 1157 aaKnown RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 METTL13Q8N6R0 699 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 ZNF564Q8TBZ8 553 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 SEMA4DQ92854 862 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 COL26A1Q96A83 441 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 ARHGEF26Q96DR7 871 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 SPATA33Q96N06 139 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 ZSWIM1Q9BR11 485 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 FAM124BQ9H5Z6 455 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 PDE11AQ9HCR9 933 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 TOPORSQ9NS56 1045 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 PRMT7Q9NVM4 692 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 ERAP1Q9NZ08 941 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 PACSIN2Q9UNF0 486 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-209ENST00000440653 TRPC6Q9Y210 931 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 SCINQ9Y6U3 715 aa9.76□□□□□ -0.85
HDAC6-209ENST00000440653 MED19A0JLT2 244 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-209ENST00000440653 FAM187AA6NFU0 413 aa9.75□□□□□ -0.85
HDAC6-209ENST00000440653 GOLGA8KD6RF30 607 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms