RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 SARNPP82979 210 aaKnown RBP14.07□□□□□ -0.16
ACTN4-204ENST00000440400 PPFIA1Q13136 1202 aa14.07□□□□□ -0.16
ACTN4-204ENST00000440400 ASB7Q9H672 318 aa14.07□□□□□ -0.16
ACTN4-204ENST00000440400 GDF3Q9NR23 364 aa14.07□□□□□ -0.16
ACTN4-204ENST00000440400 DERAQ9Y315 318 aa14.07□□□□□ -0.16
ACTN4-204ENST00000440400 MIF4GDA9UHW6 222 aaKnown RBP14.06□□□□□ -0.16
ACTN4-204ENST00000440400 PAFAH1B1P43034 410 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 ZNF568Q3ZCX4 644 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
ACTN4-204ENST00000440400 ZBTB10Q96DT7 871 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 RBM12Q9NTZ6 932 aaKnown RBP14.06□□□□□ -0.16
ACTN4-204ENST00000440400 AMFRQ9UKV5 643 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 PCDHGC3Q9UN70 934 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 UMODL1Q5DID0 1318 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 CST3P01034 146 aaPredicted RBP14.06□□□□□ -0.16
ACTN4-204ENST00000440400 RGS2P41220 211 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 ZNF157P51786 506 aaPredicted RBP14.06□□□□□ -0.16
ACTN4-204ENST00000440400 SCARA3Q6AZY7 606 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 PEX26Q7Z412 305 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 CAGE1Q8TC20 777 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 CABS1Q96KC9 395 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 NLRP4Q96MN2 994 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.06□□□□□ -0.163e-10■■■■■ 34.6
ACTN4-204ENST00000440400 NIF3L1Q9GZT8 377 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 FAM107BQ9H098 131 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 UPF3AQ9H1J1 476 aaKnown RBP14.06□□□□□ -0.16
ACTN4-204ENST00000440400 VIPAS39Q9H9C1 493 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 A0A087WZ62 844 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 ZMYND10O75800 440 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 PEX5P50542 639 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 SPOPLQ6IQ16 392 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 ZBTB33Q86T24 672 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 CEP57Q86XR8 500 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 MCOLN2Q8IZK6 566 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 AENQ8WTP8 325 aaKnown RBP14.06□□□□□ -0.16
ACTN4-204ENST00000440400 MS4A14Q96JA4 679 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 FAM84AQ96KN4 292 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 FDXACB1Q9BRP7 624 aaPredicted RBP14.06□□□□□ -0.16
ACTN4-204ENST00000440400 MTMR12Q9C0I1 747 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 SIX4Q9UIU6 781 aa14.06□□□□□ -0.16
ACTN4-204ENST00000440400 THSD7BQ9C0I4 1608 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 TCRBV5S1A1TA0A578 114 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 LSM8O95777 96 aaKnown RBP14.05□□□□□ -0.16
ACTN4-204ENST00000440400 ATICP31939 592 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 CXCR5P32302 372 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 GRM5P41594 1212 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 NAP1L1P55209 391 aaKnown RBP14.05□□□□□ -0.16
ACTN4-204ENST00000440400 NOMO3P69849 1222 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 CCNI2Q6ZMN8 369 aaPredicted RBP14.05□□□□□ -0.16
ACTN4-204ENST00000440400 DAAM2Q86T65 1068 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 CD302Q8IX05 232 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 SEC14L1Q92503 715 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 ACP6Q9NPH0 428 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 PACSIN2Q9UNF0 486 aaPredicted RBP14.05□□□□□ -0.16
ACTN4-204ENST00000440400 SCN10AQ9Y5Y9 1956 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 ARF4P18085 180 aaPredicted RBP14.05□□□□□ -0.16
ACTN4-204ENST00000440400 CTNNA1P35221 906 aaKnown RBP14.05□□□□□ -0.16
ACTN4-204ENST00000440400 TAF1CQ15572 869 aaPredicted RBP14.05□□□□□ -0.16
ACTN4-204ENST00000440400 DCAF4L1Q3SXM0 396 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 TSPAN18Q96SJ8 248 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 SELENOOQ9BVL4 669 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 C2CD2Q9Y426 696 aa14.05□□□□□ -0.16
ACTN4-204ENST00000440400 CCDC188H7C350 402 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 SMIM10L2AP0DMW4 78 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 SMIM10L2BP0DMW5 78 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 IRAK1P51617 712 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 SREBF2Q12772 1141 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 SEZ6Q53EL9 994 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 RBBP8NLQ8NC74 664 aaPredicted RBP14.04□□□□□ -0.16
ACTN4-204ENST00000440400 WNT8AQ9H1J5 351 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 EHD2Q9NZN4 543 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 INO80B-WBP1J3KQ70 363 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 STAG3L1P0CL83 205 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 CTGFP29279 349 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
ACTN4-204ENST00000440400 BIRC3Q13489 604 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 HIC1Q14526 733 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 GSPT2Q8IYD1 628 aaKnown RBP14.04□□□□□ -0.16
ACTN4-204ENST00000440400 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.04□□□□□ -0.163e-6■■■■■ 50.8
ACTN4-204ENST00000440400 LRRC1Q9BTT6 524 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 INO80BQ9C086 356 aaPredicted RBP14.04□□□□□ -0.16
ACTN4-204ENST00000440400 PLEKHA5Q9HAU0 1116 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 CITO14578 2027 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 PGRMC1O00264 195 aaKnown RBP14.04□□□□□ -0.16
ACTN4-204ENST00000440400 MATR3P43243 847 aaKnown RBP eCLIP14.04□□□□□ -0.16
ACTN4-204ENST00000440400 CPT1AP50416 773 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 MYL6P60660 151 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 CCDC181Q5TID7 509 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 ALKAL1Q6UXT8 129 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 TLK2Q86UE8 772 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 TMEM192Q8IY95 271 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 ANKRD36BP1Q96IX9 119 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 ZSWIM1Q9BR11 485 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 RPF1Q9H9Y2 349 aaKnown RBP14.04□□□□□ -0.16
ACTN4-204ENST00000440400 ZFYVE28Q9HCC9 887 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 MCM8Q9UJA3 840 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 ALG6Q9Y672 507 aa14.04□□□□□ -0.16
ACTN4-204ENST00000440400 MROH7Q68CQ1 1323 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 TMCO5BA8MYB1 307 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 KCNK3O14649 394 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms