RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 ZPBP2Q6X784 338 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 ATL2Q8NHH9 583 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 MRPL4Q9BYD3 311 aaKnown RBP12.89□□□□□ -0.35
HDAC8-214ENST00000439122 CCDC113Q9H0I3 377 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 CDC42EP4Q9H3Q1 356 aaKnown RBP12.89□□□□□ -0.35
HDAC8-214ENST00000439122 PARVAQ9NVD7 372 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 DDX20Q9UHI6 824 aaKnown RBP12.89□□□□□ -0.35
HDAC8-214ENST00000439122 CNTN6Q9UQ52 1028 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 CD2APQ9Y5K6 639 aa12.89□□□□□ -0.35
HDAC8-214ENST00000439122 SIP14410 1827 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 TOM1L1O75674 476 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 AGTP01019 485 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 ATF2P15336 505 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 EDNRBP24530 442 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 CHKAP35790 457 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 MMP13P45452 471 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 EFNA5P52803 228 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 ITGA8P53708 1063 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 C1QBPQ07021 282 aaKnown RBP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 PTP4A2Q12974 167 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 KLF1Q13351 362 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 PTK6Q13882 451 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 ZNF394Q53GI3 561 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 SYDE1Q6ZW31 735 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 TRMT10CQ7L0Y3 403 aaKnown RBP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 CPLX4Q7Z7G2 160 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 PACS2Q86VP3 889 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 TRIM50Q86XT4 487 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 RNF149Q8NC42 400 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 C3orf20Q8ND61 904 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 SCLT1Q96NL6 688 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 OSBPL8Q9BZF1 889 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 HOMER3Q9NSC5 361 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 DNAJC17Q9NVM6 304 aaKnown RBP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 KLHL11Q9NVR0 708 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 CSADQ9Y600 493 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 WDR90Q96KV7 1748 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 LOC285556D6RIA3 1793 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 MSCO60682 206 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 ASS1P00966 412 aaKnown RBP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 TGFB3P10600 412 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 MYL6P60660 151 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 RPL7AP62424 266 aaKnown RBP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 IRX3P78415 501 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 SLC20A2Q08357 652 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 LAMTOR4Q0VGL1 99 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 ERMARDQ5T6L9 678 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 WDR49Q8IV35 697 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 KATNAL2Q8IYT4 538 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 GPC2Q8N158 579 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 FEZF2Q8TBJ5 459 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 XPO6Q96QU8 1125 aaKnown RBP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 TMEM109Q9BVC6 243 aa12.88□□□□□ -0.35
HDAC8-214ENST00000439122 STMN4Q9H169 189 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-214ENST00000439122 NOP56O00567 594 aaKnown RBP12.87□□□□□ -0.35
HDAC8-214ENST00000439122 IVDP26440 423 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 AP3M2P53677 418 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 MAPK6Q16659 721 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 LONRF1Q17RB8 773 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 CCDC38Q502W7 563 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 IER5Q5VY09 327 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 PPP1R2P3Q6NXS1 205 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 ZNF365Q70YC5 407 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 YTHDF3Q7Z739 585 aaKnown RBP12.87□□□□□ -0.35
HDAC8-214ENST00000439122 EXD1Q8NHP7 514 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 CENPTQ96BT3 561 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 FAM167AQ96KS9 214 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 TRAIPQ9BWF2 469 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 ADAM7Q9H2U9 754 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 ANAPC5Q9UJX4 755 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 FAM189A1O60320 539 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 PCNTO95613 3336 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 PRKCBP05771 671 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 PGK2P07205 417 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 MMP8P22894 467 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 BRD2P25440 801 aaKnown RBP12.87□□□□□ -0.35
HDAC8-214ENST00000439122 ZNF132P52740 706 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 TFAMQ00059 246 aaKnown RBP12.87□□□□□ -0.35
HDAC8-214ENST00000439122 TRPC3Q13507 836 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 AUHQ13825 339 aaKnown RBP12.87□□□□□ -0.35
HDAC8-214ENST00000439122 CCNG2Q16589 344 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 DUOXA2Q1HG44 320 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 HSDL1Q3SXM5 330 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 GKAP1Q5VSY0 366 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-214ENST00000439122 KAZNQ674X7 775 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 RHBDF2Q6PJF5 856 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 GSTA5Q7RTV2 222 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 ANKS1BQ7Z6G8 1248 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 ZBTB8OSQ8IWT0 167 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-214ENST00000439122 CHMP6Q96FZ7 201 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 SEC16BQ96JE7 1060 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 ZNF668Q96K58 619 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-214ENST00000439122 CABS1Q96KC9 395 aa12.87□□□□□ -0.35
HDAC8-214ENST00000439122 ACO2Q99798 780 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms