RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 HPS4Q9NQG7 708 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 ECHDC1Q9NTX5 307 aa12.45□□□□□ -0.42
RTN4-211ENST00000438462 SPTBN1Q01082 2364 aaKnown RBP12.44□□□□□ -0.42
RTN4-211ENST00000438462 OTOGQ6ZRI0 2925 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 A0A1W2PQD8 194 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 FLRT2O43155 660 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 PRAMEF12O95522 483 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 PRKCBP05771 671 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 JUPP14923 745 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 MCM2P49736 904 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 ROR1Q01973 937 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 ZNF33AQ06730 810 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 GRIK3Q13003 919 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 RUNX3Q13761 415 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 PTPRNQ16849 979 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 TRIM68Q6AZZ1 485 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 ZNF410Q86VK4 478 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 ITPRIPQ8IWB1 547 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 EXD3Q8N9H8 876 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 LEMD2Q8NC56 503 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 ZNF248Q8NDW4 579 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 CNNM3Q8NE01 707 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 SNRNP27Q8WVK2 155 aaKnown RBP12.44□□□□□ -0.42
RTN4-211ENST00000438462 NANOS1Q8WY41 292 aaKnown RBP12.44□□□□□ -0.42
RTN4-211ENST00000438462 NLRP4Q96MN2 994 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 STARD5Q9NSY2 213 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 CEP72Q9P209 647 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 BTBD3Q9Y2F9 522 aa12.44□□□□□ -0.42
RTN4-211ENST00000438462 CASTOR2A6NHX0 329 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 TNFSF14O43557 240 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 RAB11FIP3O75154 756 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 ALDH1A2O94788 518 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 SEC24AO95486 1093 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 FGAP02671 866 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 PCP11498 1178 aaKnown RBP12.43□□□□□ -0.42
RTN4-211ENST00000438462 HNRNPLP14866 589 aaKnown RBP eCLIP12.43□□□□□ -0.425e-9■■■□□ 16.4
RTN4-211ENST00000438462 ALX1Q15699 326 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 CCDC178Q5BJE1 867 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 GSTCDQ8NEC7 633 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 FAM167AQ96KS9 214 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 ZNF512Q96ME7 567 aaPredicted RBP12.43□□□□□ -0.42
RTN4-211ENST00000438462 ZSCAN10Q96SZ4 725 aaPredicted RBP12.43□□□□□ -0.42
RTN4-211ENST00000438462 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.43□□□□□ -0.42
RTN4-211ENST00000438462 EIF2AQ9BY44 585 aaKnown RBP12.43□□□□□ -0.42
RTN4-211ENST00000438462 EBF3Q9H4W6 596 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 TM7SF3Q9NS93 570 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 OBP2AQ9NY56 170 aa12.43□□□□□ -0.42
RTN4-211ENST00000438462 BCCIPQ9P287 314 aaKnown RBP eCLIP12.43□□□□□ -0.42
RTN4-211ENST00000438462 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.43□□□□□ -0.422e-6■□□□□ 10
RTN4-211ENST00000438462 FNDC3AQ9Y2H6 1198 aaKnown RBP12.43□□□□□ -0.42
RTN4-211ENST00000438462 HOXA11P31270 313 aaPredicted RBP12.42□□□□□ -0.42
RTN4-211ENST00000438462 SEC13P55735 322 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 CDC42EP1Q00587 391 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 TWF1Q12792 350 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 ELAVL2Q12926 359 aaKnown RBP12.42□□□□□ -0.42
RTN4-211ENST00000438462 TARDBPQ13148 414 aaKnown RBP eCLIP12.42□□□□□ -0.423e-9■■■■■ 47
RTN4-211ENST00000438462 CRY1Q16526 586 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 UBE2SQ16763 222 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 TMEM92Q6UXU6 159 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 RHPN2Q8IUC4 686 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 KSR1Q8IVT5 923 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 TCEAL8Q8IYN2 117 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 ZNF461Q8TAF7 563 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 ZDHHC5Q9C0B5 715 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 GABBR1Q9UBS5 961 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 MMP17Q9ULZ9 603 aa12.42□□□□□ -0.42
RTN4-211ENST00000438462 CILPO75339 1184 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 ZNF883P0CG24 379 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 PCBP4P57723 403 aaKnown RBP12.41□□□□□ -0.42
RTN4-211ENST00000438462 AMPD2Q01433 879 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 SLC41A1Q8IVJ1 513 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 TRMT2AQ8IZ69 625 aaKnown RBP12.41□□□□□ -0.42
RTN4-211ENST00000438462 CCDC33Q8N5R6 958 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 USP33Q8TEY7 942 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 HSPA12BQ96MM6 686 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 FAM83CQ9BQN1 747 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 GAREM1Q9H706 876 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 GKN1Q9NS71 199 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 THG1LQ9NWX6 298 aaKnown RBP12.41□□□□□ -0.42
RTN4-211ENST00000438462 BACE2Q9Y5Z0 518 aa12.41□□□□□ -0.42
RTN4-211ENST00000438462 F8P00451 2351 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 ANTXRLA6NF34 631 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 SPDYE3A6NKU9 549 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 ABLIM3O94929 683 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 OATP04181 439 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 ATF2P15336 505 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 FGFR3P22607 806 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 GRNP28799 593 aaKnown RBP12.4□□□□□ -0.42
RTN4-211ENST00000438462 BYSLQ13895 437 aaKnown RBP12.4□□□□□ -0.42
RTN4-211ENST00000438462 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 TICAM1Q8IUC6 712 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 RGL4Q8IZJ4 473 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 HMGB4Q8WW32 186 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 CD101Q93033 1021 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.42
RTN4-211ENST00000438462 POM121Q96HA1 1249 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 TBC1D32Q96NH3 1257 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 RNF41Q9H4P4 317 aaPredicted RBP12.4□□□□□ -0.42
RTN4-211ENST00000438462 SUSD2Q9UGT4 822 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms