RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 NCDNQ9UBB6 729 aa9.41□□□□□ -0.9
NIF3L1-208ENST00000436412 TRIM33Q9UPN9 1127 aa9.41□□□□□ -0.9
NIF3L1-208ENST00000436412 PCDHB2Q9Y5E7 798 aa9.41□□□□□ -0.9
NIF3L1-208ENST00000436412 PCDHGA2Q9Y5H1 932 aa9.41□□□□□ -0.9
NIF3L1-208ENST00000436412 A0A087WZ62 844 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 KANSL1LA0AUZ9 987 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 MEIS3P2A8K0S8 358 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 NRP1O14786 923 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 LAMTOR5O43504 91 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 DDHD2O94830 711 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 GHRHP01286 108 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 GLUD2P49448 558 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 RCAN1P53805 252 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 ATXN1P54253 815 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 PRKCQQ04759 706 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 LONRF3Q496Y0 759 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 XKR3Q5GH77 459 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 RSPO2Q6UXX9 243 aaPredicted RBP9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 AGMOQ6ZNB7 445 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 RAB11FIP4Q86YS3 637 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 MAML2Q8IZL2 1156 aaPredicted RBP9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 REXO1Q8N1G1 1221 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 TP53INP1Q96A56 240 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 FDXACB1Q9BRP7 624 aaPredicted RBP9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 RTKNQ9BST9 563 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 DDX23Q9BUQ8 820 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 ZMYND12Q9H0C1 365 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 NT5C3AQ9H0P0 336 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 RSAD1Q9HA92 442 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 PIDD1Q9HB75 910 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 C6orf50Q9HD87 102 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 FAM13BQ9NYF5 915 aa9.4□□□□□ -0.9
NIF3L1-208ENST00000436412 SLC27A2O14975 620 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 ZZEF1O43149 2961 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 ZBTB43O43298 467 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 GAS2O43903 313 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 TBC1D4O60343 1298 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 B4GALT3O60512 393 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 GAS7O60861 476 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 MAFO75444 373 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 RFPL2O75678 378 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 EFEMP2O95967 443 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 GLULP15104 373 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 GNA11P29992 359 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 SCNN1AP37088 669 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 PFKPQ01813 784 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 DSG1Q02413 1049 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 CREMQ03060 361 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 DRP2Q13474 957 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 SETDB1Q15047 1291 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 PFKFB3Q16875 520 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 ADAMTSL4Q6UY14 1074 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 RHPN2Q8IUC4 686 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 EXOC8Q8IYI6 725 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 RNF168Q8IYW5 571 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 IL22RA1Q8N6P7 574 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 ZBTB44Q8NCP5 570 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 CNNM3Q8NE01 707 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 EXOC6Q8TAG9 804 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 BICD2Q8TD16 824 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 LENG9Q96B70 501 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 MEGF10Q96KG7 1140 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 CEP89Q96ST8 783 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 NELL2Q99435 816 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 FAM126AQ9BYI3 521 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 LRRC2Q9BYS8 371 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 FOXQ1Q9C009 403 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 EPC1Q9H2F5 836 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 AGPAT5Q9NUQ2 364 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 SPATA6Q9NWH7 488 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 ZSCAN32Q9NX65 697 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 FNIP2Q9P278 1114 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 SUCLA2Q9P2R7 463 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 NUMBLQ9Y6R0 609 aa9.39□□□□□ -0.91
NIF3L1-208ENST00000436412 CCDC196A0A1B0GTZ2 297 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 MSH4O15457 936 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 NCLP19338 710 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 USP11P51784 963 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 PCBP1Q15365 356 aaKnown RBP eCLIP9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 UGCGQ16739 394 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 MTERF2Q49AM1 385 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 CREB3L3Q68CJ9 461 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 MTSS1LQ765P7 747 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 GET4Q7L5D6 327 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 SRGAP1Q7Z6B7 1085 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 COLGALT2Q8IYK4 626 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 NELL1Q92832 810 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 SLC5A5Q92911 643 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 TEKT3Q9BXF9 490 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 IFT122Q9HBG6 1241 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 CHST7Q9NS84 486 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 SMG5Q9UPR3 1016 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 PPME1Q9Y570 386 aa9.38□□□□□ -0.91
NIF3L1-208ENST00000436412 FRYQ5TBA9 3013 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 GOLGA8AA7E2F4 631 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 GOLGA8BA8MQT2 603 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 TM4SF5O14894 197 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 NCAM2O15394 837 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 TGM5O43548 720 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms