RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 HARSP12081 509 aaKnown RBP11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PSMC3P17980 439 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 NCKAP1LP55160 1127 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ARPP19P56211 112 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CSTF1Q05048 431 aaKnown RBP11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TWF1Q12792 350 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 STRN3Q13033 797 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MTAPQ13126 283 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PUM1Q14671 1186 aaKnown RBP eCLIP11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 SEZ6Q53EL9 994 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 RILPL1Q5EBL4 403 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 RNF19BQ6ZMZ0 732 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 HS6ST3Q8IZP7 471 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 LRRC15Q8TF66 581 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 DEPDC1BQ8WUY9 529 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TCHPQ9BT92 498 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TRMT61BQ9BVS5 477 aaKnown RBP11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 OXCT2Q9BYC2 517 aaPredicted RBP11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 DNAJC25Q9H1X3 360 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CRISPLD1Q9H336 500 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ZNF334Q9HCZ1 680 aaPredicted RBP11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ASAH2Q9NR71 780 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 KCNG1Q9UIX4 513 aa11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 SMG5Q9UPR3 1016 aaKnown RBP11.94□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MAN2B1O00754 1011 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CLDN3O15551 220 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PLA2G4BP0C869 781 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TGM1P22735 817 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ZNF131P52739 623 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 SMTNP53814 917 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MLLT6P55198 1093 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 YWHAHQ04917 246 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 RAD51AP2Q09MP3 1159 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 C8orf34Q49A92 452 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ARSHQ5FYA8 562 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CYP4A22Q5TCH4 519 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ARL6IP4Q66PJ3 421 aaKnown RBP11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 IQCEQ6IPM2 695 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 DGLUCYQ7Z3D6 616 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ELMOD1Q8N336 334 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 SHKBP1Q8TBC3 707 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 IRF7Q92985 503 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 RSPRY1Q96DX4 576 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 FIZ1Q96SL8 496 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 HINFPQ9BQA5 517 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MKNK1Q9BUB5 465 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 FAM126AQ9BYI3 521 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 BRD9Q9H8M2 597 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ODF2LQ9ULJ1 636 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 UBQLN1Q9UMX0 589 aaKnown RBP11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MIA3Q5JRA6 1907 aa11.93□□□□□ -0.5
SPTLC1P4-201ENST00000435997 H0YCG3 227 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 SLC26A4O43511 780 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CPB1P15086 417 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 GJA1P17302 382 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TYMPP19971 482 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 SCP2P22307 547 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TNFSF9P41273 254 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PPP2R3AQ06190 1150 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 SPAG1Q07617 926 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 FCHO2Q0JRZ9 810 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 GPR17Q13304 367 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TEAD2Q15562 447 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ENOX2Q16206 610 aaKnown RBP11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TSSK4Q6SA08 328 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ZSCAN18Q8TBC5 510 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ATRIPQ8WXE1 791 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MSANTD3Q96H12 275 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 ZNF512Q96ME7 567 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 TSPAN18Q96SJ8 248 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 REEP2Q9BRK0 252 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 LARSQ9P2J5 1176 aaKnown RBP11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 HSFX1Q9UBD0 423 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PIAS3Q9Y6X2 628 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 FRYLO94915 3013 aa11.92□□□□□ -0.5
SPTLC1P4-201ENST00000435997 NPHP3-ACAD11A0A0J9YXS1 232 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MTMR11A4FU01 709 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 VWA3AA6NCI4 1184 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 OR6C75A6NL08 312 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 HEPACAM2A8MVW5 462 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PPEF2O14830 753 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 HNRNPDLO14979 420 aaKnown RBP11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 OR4Q2P0C623 313 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 CHRNB1P11230 501 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 GDI1P31150 447 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 VIPR2P41587 438 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 PLD1Q13393 1074 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MYBPC2Q14324 1141 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 GAS6Q14393 721 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 KYAT1Q16773 422 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 WDR44Q5JSH3 913 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 SPATA1Q5VX52 437 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 SLC39A4Q6P5W5 647 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 HAUS6Q7Z4H7 955 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 MFSD6LQ8IWD5 586 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 GPR161Q8N6U8 529 aaKnown RBP11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 FAM3CQ92520 227 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 KIF12Q96FN5 646 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 AK8Q96MA6 479 aa11.91□□□□□ -0.5
SPTLC1P4-201ENST00000435997 GPR88Q9GZN0 384 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms