RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 NCKAP1Q9Y2A7 1128 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 RGS12O14924 1447 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 ASS1P00966 412 aaKnown RBP11.72□□□□□ -0.53
SCN4A-201ENST00000435607 HMGCS2P54868 508 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 GLYCTKQ8IVS8 523 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 MICALL2Q8IY33 904 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 MAP4K1Q92918 833 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 SNX9Q9Y5X1 595 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 GPR182O15218 404 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 CDC27P30260 824 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 SEMA3FQ13275 785 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 ZCCHC8Q6NZY4 707 aaKnown RBP11.72□□□□□ -0.53
SCN4A-201ENST00000435607 CMTM5Q96DZ9 223 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 MYLK2Q9H1R3 596 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 TUBGCP4Q9UGJ1 667 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 F5H6K3 240 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 SEC24BO95487 1268 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 KLRC3Q07444 240 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 PRKAA1Q13131 559 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 HLA-DQA1Q5Y7H0 255 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 ITIH5Q86UX2 942 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 CDR2LQ86X02 465 aaPredicted RBP11.72□□□□□ -0.53
SCN4A-201ENST00000435607 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCN4A-201ENST00000435607 OLFM3Q96PB7 478 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 WWP1Q9H0M0 922 aa11.72□□□□□ -0.53
SCN4A-201ENST00000435607 VWA5AO00534 786 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 C2CD2LO14523 706 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 ADCY3O60266 1144 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 SYDE1Q6ZW31 735 aaPredicted RBP11.71□□□□□ -0.53
SCN4A-201ENST00000435607 GRAMD1AQ96CP6 724 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 STAMBPL1Q96FJ0 436 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 KDM5CP41229 1560 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 MROH7-TTC4A0A0A0MT08 1334 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 PRKAB2O43741 272 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 CHGBP05060 677 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 RFC5P40937 340 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 CDC16Q13042 620 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.53
SCN4A-201ENST00000435607 RSPH1Q8WYR4 309 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
SCN4A-201ENST00000435607 IARS2Q9NSE4 1012 aaKnown RBP11.71□□□□□ -0.53
SCN4A-201ENST00000435607 ERAP1Q9NZ08 941 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.71□□□□□ -0.53
SCN4A-201ENST00000435607 IFRD1O00458 451 aaPredicted RBP11.71□□□□□ -0.53
SCN4A-201ENST00000435607 DGAT1O75907 488 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 SERPINB9P50453 376 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 PDK1Q15118 436 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 SGSM1Q2NKQ1 1148 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 IYDQ6PHW0 289 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 C4orf22Q6V702 233 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 LINC00523Q86TU6 105 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 RCOR2Q8IZ40 523 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 NUP93Q8N1F7 819 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 TMC2Q8TDI7 906 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 FAR2Q96K12 515 aa11.71□□□□□ -0.53
SCN4A-201ENST00000435607 ELAC2Q9BQ52 826 aaKnown RBP11.71□□□□□ -0.53
SCN4A-201ENST00000435607 CARNS1A5YM72 827 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 FAM47DPA6NHR8 397 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 PALMO75781 387 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 KPNA1P52294 538 aaPredicted RBP11.71□□□□□ -0.54
SCN4A-201ENST00000435607 WDR72Q3MJ13 1102 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 CYP4Z1Q86W10 505 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.54
SCN4A-201ENST00000435607 CSGALNACT1Q8TDX6 532 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 CDK5RAP1Q96SZ6 601 aaKnown RBP11.71□□□□□ -0.54
SCN4A-201ENST00000435607 APOL5Q9BWW9 433 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 NAGPAQ9UK23 515 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 DYRK1BQ9Y463 629 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 ARHGEF12Q9NZN5 1544 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 KCNQ3O43525 872 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 CELF2O95319 508 aaKnown RBP11.71□□□□□ -0.54
SCN4A-201ENST00000435607 CHRM3P20309 590 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 RRM2P31350 389 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 EPHB3P54753 998 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 SP8Q8IXZ3 490 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 ATXN7L3BQ96GX2 97 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 ZNF668Q96K58 619 aaPredicted RBP11.71□□□□□ -0.54
SCN4A-201ENST00000435607 IMPAD1Q9NX62 359 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 OVOS2A0A0G2JMS6 1433 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 SOAT2O75908 522 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 FTLP02792 175 aaPredicted RBP11.71□□□□□ -0.54
SCN4A-201ENST00000435607 SCP2P22307 547 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 GTF2A2P52657 109 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 MTMR2Q13614 643 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 PIGHQ14442 188 aaPredicted RBP11.71□□□□□ -0.54
SCN4A-201ENST00000435607 EFHC1Q5JVL4 640 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 HIBCHQ6NVY1 386 aaPredicted RBP11.71□□□□□ -0.54
SCN4A-201ENST00000435607 SEPT1Q8WYJ6 367 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 ARHGEF3Q9NR81 526 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 CYP39A1Q9NYL5 469 aa11.71□□□□□ -0.54
SCN4A-201ENST00000435607 SAE1Q9UBE0 346 aaPredicted RBP11.71□□□□□ -0.54
SCN4A-201ENST00000435607 KIF1BO60333 1816 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 C17orf102A2RUQ5 167 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 P4HA2O15460 535 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 CHI3L1P36222 383 aaPredicted RBP11.7□□□□□ -0.54
SCN4A-201ENST00000435607 ETFBP38117 255 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 KIAA2013Q8IYS2 634 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 DPP10Q8N608 796 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms