RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 BMP15O95972 392 aa22.55■■□□□ 1.2
LMBR1-210ENST00000434503 MTAPQ13126 283 aa22.55■■□□□ 1.2
LMBR1-210ENST00000434503 NOLC1Q14978 699 aaKnown RBP eCLIP22.55■■□□□ 1.2
LMBR1-210ENST00000434503 SF3A1Q15459 793 aaKnown RBP22.55■■□□□ 1.2
LMBR1-210ENST00000434503 SEZ6Q53EL9 994 aa22.55■■□□□ 1.2
LMBR1-210ENST00000434503 CYP4A22Q5TCH4 519 aa22.55■■□□□ 1.2
LMBR1-210ENST00000434503 GPBP1Q86WP2 473 aa22.55■■□□□ 1.2
LMBR1-210ENST00000434503 GPR161Q8N6U8 529 aaKnown RBP22.55■■□□□ 1.2
LMBR1-210ENST00000434503 SMG5Q9UPR3 1016 aaKnown RBP22.55■■□□□ 1.2
LMBR1-210ENST00000434503 IQCEQ6IPM2 695 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 ZPBP2Q6X784 338 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 MAP4K3Q8IVH8 894 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 HS6ST3Q8IZP7 471 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 ELMOD1Q8N336 334 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 SMARCD2Q92925 531 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 IRF7Q92985 503 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 ZNF512Q96ME7 567 aaPredicted RBP22.54■■□□□ 1.2
LMBR1-210ENST00000434503 ZSWIM3Q96MP5 696 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 REEP2Q9BRK0 252 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 FAM126AQ9BYI3 521 aaPredicted RBP22.54■■□□□ 1.2
LMBR1-210ENST00000434503 BLOC1S4Q9NUP1 217 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 CEP72Q9P209 647 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 LARSQ9P2J5 1176 aaKnown RBP22.54■■□□□ 1.2
LMBR1-210ENST00000434503 AFF4Q9UHB7 1163 aaKnown RBP22.54■■□□□ 1.2
LMBR1-210ENST00000434503 MAFFQ9ULX9 164 aa22.54■■□□□ 1.2
LMBR1-210ENST00000434503 NDRG2Q9UN36 371 aaKnown RBP22.54■■□□□ 1.2
LMBR1-210ENST00000434503 CLDN3O15551 220 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 PSMC3P17980 439 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 PLCG1P19174 1290 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 MCM4P33991 863 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 LONP1P36776 959 aaKnown RBP22.53■■□□□ 1.2
LMBR1-210ENST00000434503 MATR3P43243 847 aaKnown RBP eCLIP22.53■■□□□ 1.21e-6■■■■□ 21.9
LMBR1-210ENST00000434503 NCKAP1LP55160 1127 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 MCM6Q14566 821 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 KARSQ15046 597 aaKnown RBP22.53■■□□□ 1.2
LMBR1-210ENST00000434503 SLC10A6Q3KNW5 377 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 ZNF280DQ6N043 979 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 VITQ6UXI7 678 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 HAUS6Q7Z4H7 955 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 APPL2Q8NEU8 664 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 DDX12PQ92771 950 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 SECISBP2LQ93073 1101 aaKnown RBP22.53■■□□□ 1.2
LMBR1-210ENST00000434503 BICD1Q96G01 975 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 ZNF334Q9HCZ1 680 aaPredicted RBP22.53■■□□□ 1.2
LMBR1-210ENST00000434503 TRPV5Q9NQA5 729 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 ODF2LQ9ULJ1 636 aa22.53■■□□□ 1.2
LMBR1-210ENST00000434503 PDCD11Q14690 1871 aaKnown RBP22.53■■□□□ 1.2
LMBR1-210ENST00000434503 COL4A2P08572 1712 aa22.52■■□□□ 1.2
LMBR1-210ENST00000434503 H0YCG3 227 aa22.52■■□□□ 1.2
LMBR1-210ENST00000434503 MOSPD3O75425 235 aa22.52■■□□□ 1.2
LMBR1-210ENST00000434503 GDI1P31150 447 aa22.52■■□□□ 1.2
LMBR1-210ENST00000434503 MCL1Q07820 350 aa22.52■■□□□ 1.2
LMBR1-210ENST00000434503 TWF1Q12792 350 aa22.52■■□□□ 1.2
LMBR1-210ENST00000434503 MAMSTRQ6ZN01 415 aa22.52■■□□□ 1.2
LMBR1-210ENST00000434503 RASSF8Q8NHQ8 419 aa22.52■■□□□ 1.2
LMBR1-210ENST00000434503 HAPLN2Q9GZV7 340 aa22.52■■□□□ 1.2
LMBR1-210ENST00000434503 CHRDQ9H2X0 955 aa22.52■■□□□ 1.2
LMBR1-210ENST00000434503 TICRRQ7Z2Z1 1910 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 FAM13AO94988 1023 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 PDCP20941 246 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 SDHBP21912 280 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 VIPR2P41587 438 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 EPHA5P54756 1037 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 RNF19BQ6ZMZ0 732 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 MYCT1Q8N699 235 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 LEMD2Q8NC56 503 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 RAD54LQ92698 747 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 TRPV4Q9HBA0 871 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 PCDHB8Q9UN66 801 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 CLIC4Q9Y696 253 aa22.51■■□□□ 1.19
LMBR1-210ENST00000434503 KRT18P05783 430 aaKnown RBP22.5■■□□□ 1.19
LMBR1-210ENST00000434503 MYL4P12829 197 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 TDGF1P13385 188 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 CPB1P15086 417 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 GJA1P17302 382 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 MARCKSP29966 332 aaPredicted RBP22.5■■□□□ 1.19
LMBR1-210ENST00000434503 ZSCAN18Q8TBC5 510 aaPredicted RBP22.5■■□□□ 1.19
LMBR1-210ENST00000434503 DEPDC1BQ8WUY9 529 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 FAM3CQ92520 227 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 ZHX3Q9H4I2 956 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 LMAN1LQ9HAT1 526 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 ASAH2Q9NR71 780 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 TUBGCP4Q9UGJ1 667 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 TBX20Q9UMR3 447 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 PIAS3Q9Y6X2 628 aa22.5■■□□□ 1.19
LMBR1-210ENST00000434503 CLTAP09496 248 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 CXCL8P10145 99 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 LIG4P49917 911 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 ZNF131P52739 623 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 NRLP54845 237 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 SPAG1Q07617 926 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 USP49Q70CQ1 688 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 MFSD6LQ8IWD5 586 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 TMEM130Q8N3G9 435 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 EPSTI1Q96J88 318 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 IER2Q9BTL4 223 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 PARVGQ9HBI0 331 aa22.49■■□□□ 1.19
LMBR1-210ENST00000434503 SPTBN2O15020 2390 aa22.48■■□□□ 1.19
LMBR1-210ENST00000434503 PRR5-ARHGAP8B1AHC4 643 aa22.48■■□□□ 1.19
LMBR1-210ENST00000434503 K7ENM7 598 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms