RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SLC26A4O43511 780 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 PMS2P54278 862 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 LAMTOR4Q0VGL1 99 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 CYB5D1Q6P9G0 228 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 CRELD2Q6UXH1 353 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-203ENST00000434376 ZNF365Q70YC5 407 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 PSPC1Q8WXF1 523 aaKnown RBP16.54■□□□□ 0.24
SCARF1-203ENST00000434376 SYNPO2Q9UMS6 1093 aa16.54■□□□□ 0.24
SCARF1-203ENST00000434376 SYNJ2BP-COX16A0A087WUM0 186 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 DNM1LO00429 736 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 RGS16O15492 202 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-203ENST00000434376 STBD1O95210 358 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 ECEL1O95672 775 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 CHKAP35790 457 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 PTENP60484 403 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 PRAMEF19Q5SWL8 479 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 C9orf131Q5VYM1 1079 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 SCYL2Q6P3W7 929 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 RPAINQ86UA6 219 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 MCOLN2Q8IZK6 566 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 TACO1Q9BSH4 297 aaKnown RBP16.53■□□□□ 0.24
SCARF1-203ENST00000434376 SYT11Q9BT88 431 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 COX16Q9P0S2 106 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 GTF3C4Q9UKN8 822 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 A6NNZ2 444 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 TUBB8Q3ZCM7 444 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 C7orf31Q8N865 590 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 SEC16BQ96JE7 1060 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 NAP1L3Q99457 506 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-203ENST00000434376 ARHGAP28Q9P2N2 729 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 TMEM59LQ9UK28 342 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 A0A087WZ62 844 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 POC1B-GALNT4F8VUJ3 575 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 DKC1O60832 514 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCARF1-203ENST00000434376 ITIH3Q06033 890 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 CUL1Q13616 776 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 CLEC16AQ2KHT3 1053 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 ZNF699Q32M78 642 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCARF1-203ENST00000434376 GLIS1Q8NBF1 620 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 MMP19Q99542 508 aa16.53■□□□□ 0.24
SCARF1-203ENST00000434376 FDXACB1Q9BRP7 624 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-203ENST00000434376 GREB1LQ9C091 1923 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-203ENST00000434376 KRT1P04264 644 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 COILP38432 576 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-203ENST00000434376 PLCB4Q15147 1175 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 GKAP1Q5VSY0 366 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-203ENST00000434376 LBX2Q6XYB7 198 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 ANKS1BQ7Z6G8 1248 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 TBC1D1Q86TI0 1168 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-203ENST00000434376 NLRP7Q8WX94 980 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 ZNF606Q8WXB4 792 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 LPIN3Q9BQK8 851 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 AGTPBP1Q9UPW5 1226 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 PCDHB2Q9Y5E7 798 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 GPC3P51654 580 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 GSCP56915 257 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-203ENST00000434376 ZACNQ401N2 412 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 SPATS2Q86XZ4 545 aaKnown RBP16.52■□□□□ 0.24
SCARF1-203ENST00000434376 HSPH1Q92598 858 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 CDCA5Q96FF9 252 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 OSBPL7Q9BZF2 842 aa16.52■□□□□ 0.24
SCARF1-203ENST00000434376 MTRF1LQ9UGC7 380 aaKnown RBP16.52■□□□□ 0.24
SCARF1-203ENST00000434376 A0A0A6YYK5 440 aaPredicted RBP16.52■□□□□ 0.23
SCARF1-203ENST00000434376 KIAA0391O15091 583 aaKnown RBP16.52■□□□□ 0.23
SCARF1-203ENST00000434376 PHF2O75151 1096 aa16.52■□□□□ 0.23
SCARF1-203ENST00000434376 LYPLA2O95372 231 aa16.52■□□□□ 0.23
SCARF1-203ENST00000434376 PAX7P23759 505 aa16.52■□□□□ 0.23
SCARF1-203ENST00000434376 ZBTB8OSQ8IWT0 167 aa16.52■□□□□ 0.23
SCARF1-203ENST00000434376 HVCN1Q96D96 273 aa16.52■□□□□ 0.23
SCARF1-203ENST00000434376 MFSD14AQ96MC6 490 aa16.52■□□□□ 0.23
SCARF1-203ENST00000434376 CALN1Q9BXU9 219 aa16.52■□□□□ 0.23
SCARF1-203ENST00000434376 SLITRK6Q9H5Y7 841 aa16.52■□□□□ 0.23
SCARF1-203ENST00000434376 FAM114A2Q9NRY5 505 aa16.52■□□□□ 0.23
SCARF1-203ENST00000434376 MUTP22033 750 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 PEX19P40855 299 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 ADCYAP1R1P41586 468 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 ATP11AP98196 1134 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 KIZQ2M2Z5 673 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 LIN9Q5TKA1 542 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 SAMD3Q8N6K7 520 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 RAPGEF5Q92565 580 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 CISHQ9NSE2 258 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 HMGXB4Q9UGU5 601 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 TPX2Q9ULW0 747 aaKnown RBP16.51■□□□□ 0.23
SCARF1-203ENST00000434376 NCANO14594 1321 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 MROH7Q68CQ1 1323 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 ITGB3P05106 788 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 IREB2P48200 963 aaKnown RBP16.51■□□□□ 0.23
SCARF1-203ENST00000434376 DNAJC24Q6P3W2 148 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 AFG1LQ8WV93 481 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 FAM49BQ9NUQ9 324 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 IVNS1ABPQ9Y6Y0 642 aa16.51■□□□□ 0.23
SCARF1-203ENST00000434376 HOXA7P31268 230 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-203ENST00000434376 FAM160B1Q5W0V3 765 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 ANKMY2Q8IV38 441 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 TFAP2BQ92481 460 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 DDX1Q92499 740 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms