RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 ELOA3Q8NG57 546 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 MAIP1Q8WWC4 291 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 SLCO2A1Q92959 643 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ZIM3Q96PE6 472 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 TAAR1Q96RJ0 339 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 UIMC1Q96RL1 719 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ZIC5Q96T25 663 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 TMEM117Q9H0C3 514 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 RAVER2Q9HCJ3 691 aaKnown RBP7.98□□□□□ -1.13
COL17A1-204ENST00000433822 RNF146Q9NTX7 359 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ARHGAP28Q9P2N2 729 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 PCYOX1Q9UHG3 505 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 RASAL2Q9UJF2 1139 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 NOCTQ9UK39 431 aaKnown RBP7.98□□□□□ -1.13
COL17A1-204ENST00000433822 NFU1Q9UMS0 254 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 UTP11Q9Y3A2 253 aaKnown RBP7.98□□□□□ -1.13
COL17A1-204ENST00000433822 COL11A1P12107 1806 aaPredicted RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 LOC102724159A0A0B4J2E5 919 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 ERICH4A6NGS2 130 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 TMCO5BA8MYB1 307 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 FOXN3O00409 490 aaPredicted RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CDK2AP1O14519 115 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 EIF3HO15372 352 aaKnown RBP eCLIP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 ERLIN2O94905 339 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CCNE2O96020 404 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 PTPRAP18433 802 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CNGA1P29973 690 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CHRNA3P32297 505 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 NPTX2P47972 431 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 PEX3P56589 373 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 UBXN2AP68543 259 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CDR2Q01850 454 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CYP24A1Q07973 514 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 SLC20A2Q08357 652 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 PTP4A2Q12974 167 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 SPP2Q13103 211 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 PWP2Q15269 919 aaKnown RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 SNRNP35Q16560 246 aaKnown RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 EAPPQ56P03 285 aaPredicted RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 XKR3Q5GH77 459 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 MAP1SQ66K74 1059 aaPredicted RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 SLFN12LQ6IEE8 588 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 LRRC31Q6UY01 552 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 SLC30A10Q6XR72 485 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 TRIM72Q6ZMU5 477 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 GSPT2Q8IYD1 628 aaKnown RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 GPD1LQ8N335 351 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 C12orf50Q8NA57 414 aaPredicted RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CHST13Q8NET6 341 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 HELQQ8TDG4 1101 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 PIK3R5Q8WYR1 880 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CD101Q93033 1021 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 VCPIP1Q96JH7 1222 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CAPNS2Q96L46 248 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 IFT74Q96LB3 600 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 ATP6V1G3Q96LB4 118 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 RNPC3Q96LT9 517 aaKnown RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 NT5C1BQ96P26 610 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 PSMB7Q99436 277 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CBWD1Q9BRT8 395 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 TEX13BQ9BXU2 312 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 CAPS2Q9BXY5 557 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 TXLNGYQ9BZA5 131 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 BCAS3Q9H6U6 928 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 ACAD9Q9H845 621 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 UBE2TQ9NPD8 197 aaPredicted RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 KMT5AQ9NQR1 393 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 TPSG1Q9NRR2 321 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 EHD2Q9NZN4 543 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 ZNF214Q9UL59 606 aaPredicted RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 ABT1Q9ULW3 272 aaKnown RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 SAMM50Q9Y512 469 aa7.97□□□□□ -1.13
COL17A1-204ENST00000433822 MYH9P35579 1960 aaKnown RBP7.97□□□□□ -1.13
COL17A1-204ENST00000433822 COL6A3P12111 3177 aa7.96□□□□□ -1.13
COL17A1-204ENST00000433822 DENND3A2RUS2 1198 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 GOLGA6L10A6NI86 522 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 ZNF233A6NK53 670 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 H0YGN5 161 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 SLC16A4O15374 487 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 GAS2O43903 313 aaKnown RBP7.96□□□□□ -1.14
COL17A1-204ENST00000433822 PHF2O75151 1096 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 PPFIA2O75334 1257 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 LDHAP00338 332 aaKnown RBP7.96□□□□□ -1.14
COL17A1-204ENST00000433822 ADRB2P07550 413 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 NUDT17P0C025 328 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 EIF2AK2P19525 551 aaKnown RBP7.96□□□□□ -1.14
COL17A1-204ENST00000433822 ADSSP30520 456 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 MAN1A1P33908 653 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 CTNNA1P35221 906 aaKnown RBP7.96□□□□□ -1.14
COL17A1-204ENST00000433822 SLC1A1P43005 524 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 MATR3P43243 847 aaKnown RBP eCLIP7.96□□□□□ -1.14
COL17A1-204ENST00000433822 FNTAP49354 379 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 PDE6CP51160 858 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 IRAK1P51617 712 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 AP3M2P53677 418 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 ENOX2Q16206 610 aaKnown RBP7.96□□□□□ -1.14
COL17A1-204ENST00000433822 UGCGQ16739 394 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 SEL1L2Q5TEA6 688 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 DUPD1Q68J44 220 aa7.96□□□□□ -1.14
COL17A1-204ENST00000433822 MIS18BP1Q6P0N0 1132 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms