RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 C5AR1P21730 350 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 SELENOPP49908 381 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 EXOSC10Q01780 885 aaKnown RBP7.12□□□□□ -1.27
HDAC9-213ENST00000433709 NOMO1Q15155 1222 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 CDSNQ15517 529 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 MST1LQ2TV78 715 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 PNMA8AQ86V59 439 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-213ENST00000433709 ELOA2Q8IYF1 753 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-213ENST00000433709 EDAQ92838 391 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 TUBD1Q9UJT1 453 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 DNM3Q9UQ16 869 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 MRFAP1Q9Y605 127 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 ITGB4P16144 1822 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 COL24A1Q17RW2 1714 aa7.12□□□□□ -1.27
HDAC9-213ENST00000433709 PHF2O75151 1096 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 NDUFS2O75306 463 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 HMOX1P09601 288 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 PDGFRBP09619 1106 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 GZMKP49863 264 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 HHEXQ03014 270 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 MRPL49Q13405 166 aaKnown RBP7.11□□□□□ -1.27
HDAC9-213ENST00000433709 ITPK1Q13572 414 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 ELAVL1Q15717 326 aaKnown RBP7.11□□□□□ -1.27
HDAC9-213ENST00000433709 REPS2Q8NFH8 660 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 MDM1Q8TC05 714 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 ZNF480Q8WV37 535 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 DPF2Q92785 391 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 IL17RAQ96F46 866 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 FAM89AQ96GI7 184 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 TEKT5Q96M29 485 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 C1QTNF3Q9BXJ4 246 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 EPC1Q9H2F5 836 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 TRPS1Q9UHF7 1281 aa7.11□□□□□ -1.27
HDAC9-213ENST00000433709 KDM6AO15550 1401 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-213ENST00000433709 CAPN14A8MX76 684 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 MMP10P09238 476 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 CCND1P24385 295 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 HIBADHP31937 336 aaKnown RBP7.1□□□□□ -1.27
HDAC9-213ENST00000433709 CRKLP46109 303 aaKnown RBP7.1□□□□□ -1.27
HDAC9-213ENST00000433709 KRTAP10-2P60368 255 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 SEPT2Q15019 361 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 MTHFSDQ2M296 383 aaKnown RBP7.1□□□□□ -1.27
HDAC9-213ENST00000433709 LCE1DQ5T752 114 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 FBXO18Q8NFZ0 1043 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 OR2I1PQ8NGU4 316 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 PNISRQ8TF01 805 aaKnown RBP7.1□□□□□ -1.27
HDAC9-213ENST00000433709 NRG4Q8WWG1 115 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 SSH1Q8WYL5 1049 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 HOXB13Q92826 284 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-213ENST00000433709 CDC5LQ99459 802 aaKnown RBP7.1□□□□□ -1.27
HDAC9-213ENST00000433709 TYW1Q9NV66 732 aaKnown RBP7.1□□□□□ -1.27
HDAC9-213ENST00000433709 SPEF1Q9Y4P9 236 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 TAF1LQ8IZX4 1826 aa7.1□□□□□ -1.27
HDAC9-213ENST00000433709 WNT10BO00744 389 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 MUSKO15146 869 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 GASTP01350 101 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 U2AF1L5P0DN76 240 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-213ENST00000433709 ECHS1P30084 290 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 KRT85P78386 507 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 U2AF1Q01081 240 aaKnown RBP eCLIP7.09□□□□□ -1.27
HDAC9-213ENST00000433709 APBA1Q02410 837 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 PRKD1Q15139 912 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-213ENST00000433709 RALBP1Q15311 655 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 PRAMEF14Q5SWL7 426 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 FAM180AQ6UWF9 173 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 BORCS6Q96GS4 357 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 SLC13A1Q9BZW2 595 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 INTUQ9ULD6 942 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 TOGARAM1Q9Y4F4 1720 aa7.09□□□□□ -1.27
HDAC9-213ENST00000433709 USP42Q9H9J4 1324 aaKnown RBP7.08□□□□□ -1.28
HDAC9-213ENST00000433709 GYS1P13807 737 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 PPP2R1AP30153 589 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 CRHR1P34998 444 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 PTPN7P35236 360 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 MGAT2Q10469 447 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 SPDYAQ5MJ70 313 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 MFSD14BQ5SR56 506 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 MFSD5Q6N075 450 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 ZNF790Q6PG37 636 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 XYLT1Q86Y38 959 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 TRMT2AQ8IZ69 625 aaKnown RBP7.08□□□□□ -1.28
HDAC9-213ENST00000433709 MB21D1Q8N884 522 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 OR7D4Q8NG98 312 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 MIEF2Q96C03 454 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 CEP95Q96GE4 821 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 BCO1Q9HAY6 547 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 NARFQ9UHQ1 456 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 TSC22D4Q9Y3Q8 395 aa7.08□□□□□ -1.28
HDAC9-213ENST00000433709 UBR3Q6ZT12 1888 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 MRC1P22897 1456 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 ADRB1P08588 477 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 CYP19A1P11511 503 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-213ENST00000433709 GNAT2P19087 354 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 PRKAR2BP31323 418 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 SREBF1P36956 1147 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 SLC6A9P48067 706 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 NEK2P51955 445 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 PER3P56645 1201 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 KIF23Q02241 960 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-213ENST00000433709 LMOD3Q0VAK6 560 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms