RNA–Protein interactions for RNA: ENST00000433179.3

PERM1-202, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PERM1, Length 3,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-202ENST00000433179 DNAJC14Q6Y2X3 702 aaPredicted RBP13.9□□□□□ -0.18
PERM1-202ENST00000433179 CYFIP1Q7L576 1253 aa13.9□□□□□ -0.18
PERM1-202ENST00000433179 SDCCAG8Q86SQ7 713 aaPredicted RBP13.9□□□□□ -0.18
PERM1-202ENST00000433179 ALG3Q92685 438 aa13.9□□□□□ -0.18
PERM1-202ENST00000433179 SEMA4DQ92854 862 aa13.9□□□□□ -0.18
PERM1-202ENST00000433179 DTNBP1Q96EV8 351 aa13.9□□□□□ -0.18
PERM1-202ENST00000433179 RMDN3Q96TC7 470 aa13.9□□□□□ -0.18
PERM1-202ENST00000433179 STRA6Q9BX79 667 aa13.9□□□□□ -0.18
PERM1-202ENST00000433179 CTTNBP2NLQ9P2B4 639 aa13.9□□□□□ -0.18
PERM1-202ENST00000433179 ASAP2O43150 1006 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 YWHABP31946 246 aaKnown RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 TTLL12Q14166 644 aaPredicted RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 SEZ6Q53EL9 994 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 EAPPQ56P03 285 aaPredicted RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 C1orf220Q5T0J3 134 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 SLC47A2Q86VL8 602 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.89□□□□□ -0.19
PERM1-202ENST00000433179 BSNDQ8WZ55 320 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 KLRG1Q96E93 195 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 DDX50Q9BQ39 737 aaKnown RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 METTL14Q9HCE5 456 aaKnown RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 INTUQ9ULD6 942 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 ASB3Q9Y575 518 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 UBIAD1Q9Y5Z9 338 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 RBM47A0AV96 593 aaKnown RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 CYP26A1O43174 497 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 TNFAIP3P21580 790 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 MMP13P45452 471 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 PEX5P50542 639 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 MPP3Q13368 585 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 BAATQ14032 418 aaPredicted RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 LBX2Q6XYB7 198 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 TAOK1Q7L7X3 1001 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 HAUS6Q7Z4H7 955 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 SNRNP27Q8WVK2 155 aaKnown RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 TRIM7Q9C029 511 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 RPAP3Q9H6T3 665 aaPredicted RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 PRDM16Q9HAZ2 1276 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 USP15Q9Y4E8 981 aaPredicted RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 TCRBV7S2A1N4TA0A589 114 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 SMAPO00193 183 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 FAM200BP0CF97 657 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 GAP43P17677 238 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 LMNB1P20700 586 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 PTENP60484 403 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 MKRN3Q13064 507 aaKnown RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 C6orf118Q5T5N4 469 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 VSIG1Q86XK7 387 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 ATL2Q8NHH9 583 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 ARHGEF2Q92974 986 aaKnown RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 ZNF668Q96K58 619 aaPredicted RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 PCDHB18PQ96TA0 734 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 ADAM7Q9H2U9 754 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 AGO4Q9HCK5 861 aaKnown RBP13.89□□□□□ -0.19
PERM1-202ENST00000433179 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.89□□□□□ -0.19
PERM1-202ENST00000433179 APEX2Q9UBZ4 518 aa13.89□□□□□ -0.19
PERM1-202ENST00000433179 PFASO15067 1338 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 TMEM120BA0PK00 339 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 CES2O00748 559 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 SNX3O60493 162 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 LYPLA2O95372 231 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 PTPRAP18433 802 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 VCAM1P19320 739 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 ZNF131P52739 623 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 HMGCS2P54868 508 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 MESDQ14696 234 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 FAM182AQ5T1J6 154 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 PIGWQ7Z7B1 504 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 HSPBP1Q9NZL4 362 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 AFG3L2Q9Y4W6 797 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 FTLP02792 175 aaPredicted RBP13.88□□□□□ -0.19
PERM1-202ENST00000433179 ZCCHC18P0CG32 403 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 CALB2P22676 271 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 ADSSP30520 456 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 RPL21P46778 160 aaKnown RBP13.88□□□□□ -0.19
PERM1-202ENST00000433179 PCNX4Q63HM2 1172 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 ZNF365Q70YC5 407 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 LMO3Q8TAP4 145 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 TMEM237Q96Q45 408 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 NAP1L3Q99457 506 aaPredicted RBP13.88□□□□□ -0.19
PERM1-202ENST00000433179 FAM118BQ9BPY3 351 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 SENP7Q9BQF6 1050 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 VCX3BQ9H321 246 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 RNPEPL1Q9HAU8 725 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 VCX3AQ9NNX9 186 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 CTNNAL1Q9UBT7 734 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 CHMP2BQ9UQN3 213 aa13.88□□□□□ -0.19
PERM1-202ENST00000433179 ADM5C9JUS6 153 aa13.87□□□□□ -0.19
PERM1-202ENST00000433179 HNRNPRO43390 633 aaKnown RBP13.87□□□□□ -0.19
PERM1-202ENST00000433179 UBTFL6P0CB48 400 aaPredicted RBP13.87□□□□□ -0.19
PERM1-202ENST00000433179 PTDSS1P48651 473 aaKnown RBP13.87□□□□□ -0.19
PERM1-202ENST00000433179 VAMP7P51809 220 aa13.87□□□□□ -0.19
PERM1-202ENST00000433179 LBRQ14739 615 aaKnown RBP13.87□□□□□ -0.19
PERM1-202ENST00000433179 TRIP13Q15645 432 aaPredicted RBP13.87□□□□□ -0.19
PERM1-202ENST00000433179 RNF168Q8IYW5 571 aaPredicted RBP13.87□□□□□ -0.19
PERM1-202ENST00000433179 SLC16A3O15427 465 aaKnown RBP13.87□□□□□ -0.19
PERM1-202ENST00000433179 CACNA2D1P54289 1103 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms