RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 NOX1Q9Y5S8 564 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 PMF1-BGLAPU3KQ54 211 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 ATP8B3O60423 1300 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 A0A1W2PRG0 241 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 M0R3H8 397 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ULK1O75385 1050 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 PABPC4LP0CB38 370 aaKnown RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 VAV1P15498 845 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 CCNA2P20248 432 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 PMLP29590 882 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 FNTAP49354 379 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 GALK1P51570 392 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ARFIP1P53367 373 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 EEF1A1P68104 462 aaKnown RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 PHEXP78562 749 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 EEF1A2Q05639 463 aaKnown RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 LGALS3BPQ08380 585 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SSRP1Q08945 709 aaKnown RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 IFFO1Q0D2I5 559 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SMARCB1Q12824 385 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 PIN1Q13526 163 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SGCAQ16586 387 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 NDUFA5Q16718 116 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ACCSLQ4AC99 568 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 EEF1A1P5Q5VTE0 462 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 KDM7AQ6ZMT4 941 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SPOCD1Q6ZMY3 1216 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SPATA24Q86W54 205 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ELMOD2Q8IZ81 293 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 FANK1Q8TC84 345 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 KCTD13Q8WZ19 329 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SNF8Q96H20 258 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 TMX3Q96JJ7 454 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SERINC2Q96SA4 455 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ZPBPQ9BS86 351 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 AP5M1Q9H0R1 490 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SLC12A5Q9H2X9 1139 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SLC38A10Q9HBR0 1119 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SLC40A1Q9NP59 571 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 DNAJC11Q9NVH1 559 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 STIM2Q9P246 746 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 CCDC171Q6TFL3 1326 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 IBTKQ9P2D0 1353 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 LOC105371267A0A1B0GV96 52 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 PIK3CDO00329 1044 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SOCS7O14512 581 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 FSCN2O14926 492 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SHOXO15266 292 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SMNDC1O75940 238 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 FSBPO95073 299 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ANP32DO95626 131 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 URODP06132 367 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ARF4P18085 180 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 DDX6P26196 483 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 HOXC12P31275 282 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 GRIK1P39086 918 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 FXR2P51116 673 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 GSTM4Q03013 218 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ARL13BQ3SXY8 428 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 CEP55Q53EZ4 464 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 AKIRIN2Q53H80 203 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 TTC22Q5TAA0 569 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 MZT2AQ6P582 158 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 MEX3BQ6ZN04 569 aaKnown RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 THAP5Q7Z6K1 395 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 UNC5CLQ8IV45 518 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SLC38A6Q8IZM9 456 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 MAB21L3Q8N8X9 362 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SSH3Q8TE77 659 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 OTUD5Q96G74 571 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 PANX2Q96RD6 677 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 PAIP1Q9H074 479 aaKnown RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 DCTPP1Q9H773 170 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 THAP1Q9NVV9 213 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 GGA2Q9UJY4 613 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SCAF8Q9UPN6 1271 aaKnown RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 CARMIL1Q5VZK9 1371 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 GNB5O14775 395 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 HOXC11O43248 304 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 GDF11O95390 407 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 FTCDO95954 541 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SRGAP2BP0DMP2 458 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 IDO1P14902 403 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 LSP1P33241 339 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 PRKCIP41743 596 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SLC1A1P43005 524 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 RAC1P63000 192 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ATP1A4Q13733 1029 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 CBX2Q14781 532 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 GLE1Q53GS7 698 aaKnown RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 INTS3Q68E01 1043 aaKnown RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ZSCAN25Q6NSZ9 544 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 FAM122CQ6P4D5 195 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 LRRC8BQ6P9F7 803 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 C11orf88Q6PI97 169 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ERICH1Q86X53 443 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 LIX1LQ8IVB5 337 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 NUDCD3Q8IVD9 361 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 CARFQ8N187 725 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 SLC43A2Q8N370 569 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms