RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 XPAP23025 273 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 MMP13P45452 471 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 MAPKAPK5Q8IW41 473 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 KAT2BQ92831 832 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 RBM17Q96I25 401 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 C8orf37Q96NL8 207 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 OSBPL10Q9BXB5 764 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 SYNDIG1Q9H7V2 258 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 ARHGEF10LQ9HCE6 1279 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 SSU72Q9NP77 194 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 SLC24A2Q9UI40 661 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 LEMD3Q9Y2U8 911 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 GIT1Q9Y2X7 761 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 CSDE1O75534 798 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 CASP1P29466 404 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 COPAP53621 1224 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 EXOSC10Q01780 885 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 SCUBE1Q8IWY4 988 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 FAM178BQ8IXR5 827 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 USP38Q8NB14 1042 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 NOL6Q9H6R4 1146 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 PDPK1O15530 556 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 PJA2O43164 708 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 ALDH18A1P54886 795 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 TYSND1Q2T9J0 566 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 BOLA3Q53S33 107 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 C4orf22Q6V702 233 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 NUDCD3Q8IVD9 361 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 ENDOVQ8N8Q3 282 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 SNX31Q8N9S9 440 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 FNDC8Q8TC99 324 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 OSBPL11Q9BXB4 747 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 LRRIQ4A6NIV6 560 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 PGM3O95394 542 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 OATP04181 439 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 ATP1A1P05023 1023 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 SOX6P35712 828 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 MORF4L2Q15014 288 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 TWF2Q6IBS0 349 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 PRMT9Q6P2P2 845 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 BEGAINQ9BUH8 593 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 BTG4Q9NY30 223 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 TPRP12270 2363 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 JCADQ9P266 1359 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 H0YJX3 145 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 KPNA3O00505 521 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 MT-ND3P03897 115 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 PLTPP55058 493 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 SF3B3Q15393 1217 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIP10Q15642 601 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 ZC3H12AQ5D1E8 599 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 NFRKBQ6P4R8 1299 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 LONP2Q86WA8 852 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 PIK3C3Q8NEB9 887 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 ENGASEQ8NFI3 743 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 TEX13BQ9BXU2 312 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 GNPTGQ9UJJ9 305 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 PVALEFA0A1B0GWK0 134 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 TEX33O43247 280 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIM23P36406 574 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 GFPT1Q06210 699 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 FAM26FQ5R3K3 315 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 RNF207Q6ZRF8 634 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 PRDM16Q9HAZ2 1276 aa7.89□□□□□ -1.15
SYNPO2-202ENST00000429713 FADS2P1A8MWK0 482 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 SNAP91O60641 907 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 POU5F1Q01860 360 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ART3Q13508 389 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIP13Q15645 432 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 RFFLQ8WZ73 363 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 AGAP3Q96P47 875 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 KATNAL1Q9BW62 490 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 SEL1LQ9UBV2 794 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 RTN2O75298 545 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 LRRN2O75325 713 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 IGKV5-2P06315 115 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 F8A1P23610 371 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 GJA9P57773 515 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 CHRNDQ07001 517 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 SPATS1Q496A3 300 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 LCORLQ8N3X6 602 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 SLC10A4Q96EP9 437 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 RSPH9Q9H1X1 276 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 FAM153AQ9UHL3 310 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 GDAQ9Y2T3 454 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 TRIM49BA6NDI0 452 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 KPNA7A9QM74 516 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF185O15231 689 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 SLC22A2O15244 555 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ZSCAN9O15535 394 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 RGS20O76081 388 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 SP100P23497 879 aaPredicted RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 EEF1B2P24534 225 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 HSD17B3P37058 310 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 AKAP14Q86UN6 197 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ARHGEF1Q92888 912 aaKnown RBP7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 ERP44Q9BS26 406 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 SUN2Q9UH99 717 aa7.88□□□□□ -1.15
SYNPO2-202ENST00000429713 CPDO75976 1380 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms