RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PPP1R7Q15435 360 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 SNCBQ16143 134 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 TKFCQ3LXA3 575 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 C1orf220Q5T0J3 134 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 TRIM72Q6ZMU5 477 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 RNF207Q6ZRF8 634 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 NOP9Q86U38 636 aaKnown RBP9.27□□□□□ -0.93
GABPB1-205ENST00000429662 MAP4K3Q8IVH8 894 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 OGFOD1Q8N543 542 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 FBXL13Q8NEE6 735 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 CCHCR1Q8TD31 782 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 ACER1Q8TDN7 264 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 ATXN2LQ8WWM7 1075 aaKnown RBP9.27□□□□□ -0.93
GABPB1-205ENST00000429662 LPAR1Q92633 364 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 ZNF653Q96CK0 615 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 MFSD14AQ96MC6 490 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 FBXL18Q96ME1 805 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 PCDHB18PQ96TA0 734 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 SELENOSQ9BQE4 189 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 SENP7Q9BQF6 1050 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 CCDC77Q9BR77 488 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 CBWD1Q9BRT8 395 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 NTPCRQ9BSD7 190 aaKnown RBP9.27□□□□□ -0.93
GABPB1-205ENST00000429662 OSBPL7Q9BZF2 842 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 PCIF1Q9H4Z3 704 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 AZI2Q9H6S1 392 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 BCAS3Q9H6U6 928 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 POLD4Q9HCU8 107 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 CCPG1Q9ULG6 757 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 ZMYND8Q9ULU4 1186 aaPredicted RBP9.27□□□□□ -0.93
GABPB1-205ENST00000429662 TBX20Q9UMR3 447 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 SNCAIPQ9Y6H5 919 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 WDFY4Q6ZS81 3184 aa9.27□□□□□ -0.93
GABPB1-205ENST00000429662 PHIPQ8WWQ0 1821 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 A0A1B0GUA9 196 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 TLDC2A0PJX2 215 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 CLRN2A0PK11 232 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 SPDYE5A6NIY4 337 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 TMEM110-MUSTN1A8MSY1 372 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 WDR64B1ANS9 1081 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 WDR46O15213 610 aaKnown RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 SHBGP04278 402 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 ASNSP08243 561 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 RARAP10276 462 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 GARTP22102 1010 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 CAP2P40123 477 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 IREB2P48200 963 aaKnown RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 GSCP56915 257 aaPredicted RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 MAP3K10Q02779 954 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 PRKCZQ05513 592 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 NR1H3Q13133 447 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 DMP1Q13316 513 aaPredicted RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 MTMR1Q13613 665 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 AUHQ13825 339 aaKnown RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 PTK6Q13882 451 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 ARHGEF6Q15052 776 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 SIX1Q15475 284 aaPredicted RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 SNRNP35Q16560 246 aaKnown RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 QPCTQ16769 361 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 CLEC16AQ2KHT3 1053 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 ZNF568Q3ZCX4 644 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 LIN9Q5TKA1 542 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 ADAT2Q7Z6V5 191 aaKnown RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 PALB2Q86YC2 1186 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 RELL1Q8IUW5 271 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 PARP9Q8IXQ6 854 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 FUKQ8N0W3 1084 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 PPM1KQ8N3J5 372 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 RIBC1Q8N443 379 aaPredicted RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 PROCA1Q8NCQ7 364 aaPredicted RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 ANKK1Q8NFD2 765 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 ATL2Q8NHH9 583 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 HELQQ8TDG4 1101 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 PARD3BQ8TEW8 1205 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 KRT35Q92764 455 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 KCNN1Q92952 543 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 SNF8Q96H20 258 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 PAWRQ96IZ0 340 aaKnown RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 VCPIP1Q96JH7 1222 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 NCAPGQ9BPX3 1015 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 SEMA4AQ9H3S1 761 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 GEMIN8Q9NWZ8 242 aaKnown RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 RAB20Q9NX57 234 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 ZNF70Q9UC06 446 aaPredicted RBP9.26□□□□□ -0.93
GABPB1-205ENST00000429662 GABRQQ9UN88 632 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 ACTL7BQ9Y614 415 aa9.26□□□□□ -0.93
GABPB1-205ENST00000429662 PHF20L1A8MW92 1017 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 O00370 1275 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 CYP26A1O43174 497 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 PSTPIP1O43586 416 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 SORBS3O60504 671 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 MAPK4P31152 587 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 PSMC4P43686 418 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 GTF2A2P52657 109 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 PEX3P56589 373 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 RIPK1Q13546 671 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 CNGA2Q16280 664 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 SGO2Q562F6 1265 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 ZNF746Q6NUN9 644 aaPredicted RBP9.25□□□□□ -0.93
GABPB1-205ENST00000429662 TTC27Q6P3X3 843 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms