RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 IQCEQ6IPM2 695 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 ELMOD1Q8N336 334 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 SYT2Q8N9I0 419 aaPredicted RBP18.04■□□□□ 0.48
VARS-216ENST00000428445 TTC8Q8TAM2 541 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 SHKBP1Q8TBC3 707 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 FAM3CQ92520 227 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 NELL1Q92832 810 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 SMARCD2Q92925 531 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 KIF12Q96FN5 646 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 TMEM209Q96SK2 561 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 SH2B1Q9NRF2 756 aaPredicted RBP18.04■□□□□ 0.48
VARS-216ENST00000428445 DLL3Q9NYJ7 618 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 PCDHGA2Q9Y5H1 932 aa18.04■□□□□ 0.48
VARS-216ENST00000428445 VWA3AA6NCI4 1184 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 HEPACAM2A8MVW5 462 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 LACTBL1A8MY62 500 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 SPTLC1O15269 473 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 CLDN3O15551 220 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 PLA2G4BP0C869 781 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 PSMC3P17980 439 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 CCNE1P24864 410 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 PRPHP41219 470 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 MAGEA9P43362 315 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 SOX9P48436 509 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 MCL1Q07820 350 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 DUSP4Q13115 394 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 DHX8Q14562 1220 aaKnown RBP18.03■□□□□ 0.48
VARS-216ENST00000428445 TTC9BQ8N6N2 239 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 APPL2Q8NEU8 664 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 LRRC15Q8TF66 581 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 SPIRE2Q8WWL2 714 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 DNASE1L2Q92874 299 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 LRRC3Q9BY71 257 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 DNAJC25Q9H1X3 360 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 C17orf75Q9HAS0 396 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 PRMT8Q9NR22 394 aaPredicted RBP18.03■□□□□ 0.48
VARS-216ENST00000428445 SMG5Q9UPR3 1016 aaKnown RBP18.03■□□□□ 0.48
VARS-216ENST00000428445 MRPS17Q9Y2R5 130 aaKnown RBP18.03■□□□□ 0.48
VARS-216ENST00000428445 YIPF1Q9Y548 306 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 PIAS3Q9Y6X2 628 aa18.03■□□□□ 0.48
VARS-216ENST00000428445 A0A1W2PRU2 124 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 TTC26A0AVF1 554 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 M0QZQ0 153 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 MICAL2O94851 1124 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 TDGF1P13385 188 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 YWHAHQ04917 246 aaPredicted RBP18.02■□□□□ 0.48
VARS-216ENST00000428445 GAS6Q14393 721 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 ZBTB6Q15916 424 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 HYIQ5T013 277 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 IRF7Q92985 503 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 FAM212AQ96EL1 285 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 BICD1Q96G01 975 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 LRRC3BQ96PB8 259 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 SLITRK6Q9H5Y7 841 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 PARD6AQ9NPB6 346 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 ASAH2Q9NR71 780 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 RBM12Q9NTZ6 932 aaKnown RBP18.02■□□□□ 0.48
VARS-216ENST00000428445 KCNG1Q9UIX4 513 aa18.02■□□□□ 0.48
VARS-216ENST00000428445 LAD1O00515 517 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 MAN2B1O00754 1011 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 ZNF263O14978 683 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 TGM1P22735 817 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 SMTNP53814 917 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 EPHA5P54756 1037 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 ATP2C1P98194 919 aaPredicted RBP18.01■□□□□ 0.47
VARS-216ENST00000428445 SATB1Q01826 763 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 DMWDQ09019 674 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 WDR44Q5JSH3 913 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 ZPBP2Q6X784 338 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 DSTYKQ6XUX3 929 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 TMC8Q8IU68 726 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 KCTD17Q8N5Z5 321 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 ATAD1Q8NBU5 361 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 BEST2Q8NFU1 509 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 EPC1Q9H2F5 836 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 CHRDQ9H2X0 955 aa18.01■□□□□ 0.47
VARS-216ENST00000428445 ARNTLO00327 626 aa18■□□□□ 0.47
VARS-216ENST00000428445 OAZ2O95190 189 aa18■□□□□ 0.47
VARS-216ENST00000428445 CLTAP09496 248 aa18■□□□□ 0.47
VARS-216ENST00000428445 CHRNB1P11230 501 aa18■□□□□ 0.47
VARS-216ENST00000428445 LRPAP1P30533 357 aa18■□□□□ 0.47
VARS-216ENST00000428445 ATXN1P54253 815 aaKnown RBP18■□□□□ 0.47
VARS-216ENST00000428445 ENOX2Q16206 610 aaKnown RBP18■□□□□ 0.47
VARS-216ENST00000428445 HAUS6Q7Z4H7 955 aa18■□□□□ 0.47
VARS-216ENST00000428445 MFSD6LQ8IWD5 586 aa18■□□□□ 0.47
VARS-216ENST00000428445 ZFYVE19Q96K21 471 aa18■□□□□ 0.47
VARS-216ENST00000428445 TIPINQ9BVW5 301 aa18■□□□□ 0.47
VARS-216ENST00000428445 C2orf42Q9NWW7 574 aa18■□□□□ 0.47
VARS-216ENST00000428445 USP18Q9UMW8 372 aa18■□□□□ 0.47
VARS-216ENST00000428445 KIF26AQ9ULI4 1882 aaPredicted RBP17.99■□□□□ 0.47
VARS-216ENST00000428445 NCOR2Q9Y618 2525 aa17.99■□□□□ 0.47
VARS-216ENST00000428445 SLC38A8A6NNN8 435 aa17.99■□□□□ 0.47
VARS-216ENST00000428445 FAM189A1O60320 539 aa17.99■□□□□ 0.47
VARS-216ENST00000428445 NCKAP1LP55160 1127 aa17.99■□□□□ 0.47
VARS-216ENST00000428445 SRSF5Q13243 272 aaKnown RBP17.99■□□□□ 0.47
VARS-216ENST00000428445 TMEM119Q4V9L6 283 aa17.99■□□□□ 0.47
VARS-216ENST00000428445 USP37Q86T82 979 aa17.99■□□□□ 0.47
VARS-216ENST00000428445 CDK5RAP3Q96JB5 506 aa17.99■□□□□ 0.47
VARS-216ENST00000428445 REEP2Q9BRK0 252 aa17.99■□□□□ 0.47
VARS-216ENST00000428445 PLEKHA5Q9HAU0 1116 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms